Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
VPS36Q86VN1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
VPS36Q86VN1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.72■■□□□ 1.87
VPS36Q86VN1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.72■■□□□ 1.87
VPS36Q86VN1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.72■■□□□ 1.87
VPS36Q86VN1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
VPS36Q86VN1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.72■■□□□ 1.87
VPS36Q86VN1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
VPS36Q86VN1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
VPS36Q86VN1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
VPS36Q86VN1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
VPS36Q86VN1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
VPS36Q86VN1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.87
VPS36Q86VN1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
VPS36Q86VN1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
VPS36Q86VN1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
VPS36Q86VN1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
VPS36Q86VN1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.69■■□□□ 1.86
VPS36Q86VN1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
VPS36Q86VN1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
VPS36Q86VN1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
VPS36Q86VN1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
VPS36Q86VN1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
VPS36Q86VN1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
VPS36Q86VN1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.67■■□□□ 1.86
VPS36Q86VN1 DUX4L29-201ENST00000425409 679 ntBASIC26.67■■□□□ 1.86
VPS36Q86VN1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.66■■□□□ 1.86
VPS36Q86VN1 AC021231.2-201ENST00000594613 730 ntBASIC26.66■■□□□ 1.86
VPS36Q86VN1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.65■■□□□ 1.86
VPS36Q86VN1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
VPS36Q86VN1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
VPS36Q86VN1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
VPS36Q86VN1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
VPS36Q86VN1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.64■■□□□ 1.86
VPS36Q86VN1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
VPS36Q86VN1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.64■■□□□ 1.86
VPS36Q86VN1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
VPS36Q86VN1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
VPS36Q86VN1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS36Q86VN1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS36Q86VN1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
VPS36Q86VN1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.62■■□□□ 1.85
VPS36Q86VN1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.62■■□□□ 1.85
VPS36Q86VN1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.62■■□□□ 1.85
VPS36Q86VN1 AL449106.1-201ENST00000608517 1980 ntBASIC26.62■■□□□ 1.85
VPS36Q86VN1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.61■■□□□ 1.85
VPS36Q86VN1 AC091060.1-201ENST00000623524 1766 ntBASIC26.61■■□□□ 1.85
VPS36Q86VN1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
VPS36Q86VN1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.6■■□□□ 1.85
VPS36Q86VN1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
VPS36Q86VN1 AP004609.3-201ENST00000610705 1884 ntBASIC26.59■■□□□ 1.85
VPS36Q86VN1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
VPS36Q86VN1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
VPS36Q86VN1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
VPS36Q86VN1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.59■■□□□ 1.85
VPS36Q86VN1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
VPS36Q86VN1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
VPS36Q86VN1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.58■■□□□ 1.85
VPS36Q86VN1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
VPS36Q86VN1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
VPS36Q86VN1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.58■■□□□ 1.85
VPS36Q86VN1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.57■■□□□ 1.84
VPS36Q86VN1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS36Q86VN1 ABHD17AP4-201ENST00000411545 909 ntBASIC26.56■■□□□ 1.84
VPS36Q86VN1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
VPS36Q86VN1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.55■■□□□ 1.84
VPS36Q86VN1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
VPS36Q86VN1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
VPS36Q86VN1 AC145676.1-201ENST00000514988 2004 ntBASIC26.54■■□□□ 1.84
VPS36Q86VN1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VPS36Q86VN1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VPS36Q86VN1 WHAMMP3-201ENST00000611636 1609 ntBASIC26.54■■□□□ 1.84
VPS36Q86VN1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
VPS36Q86VN1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.53■■□□□ 1.84
VPS36Q86VN1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VPS36Q86VN1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
VPS36Q86VN1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VPS36Q86VN1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
VPS36Q86VN1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VPS36Q86VN1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
VPS36Q86VN1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
VPS36Q86VN1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
VPS36Q86VN1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
VPS36Q86VN1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
VPS36Q86VN1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.52■■□□□ 1.84
VPS36Q86VN1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.51■■□□□ 1.84
VPS36Q86VN1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.51■■□□□ 1.83
VPS36Q86VN1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
VPS36Q86VN1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.51■■□□□ 1.83
VPS36Q86VN1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.51■■□□□ 1.83
VPS36Q86VN1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.51■■□□□ 1.83
VPS36Q86VN1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
VPS36Q86VN1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
VPS36Q86VN1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.5■■□□□ 1.83
VPS36Q86VN1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VPS36Q86VN1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
VPS36Q86VN1 AC142472.1-201ENST00000612013 1741 ntBASIC26.49■■□□□ 1.83
VPS36Q86VN1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.49■■□□□ 1.83
VPS36Q86VN1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VPS36Q86VN1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms