Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 DUX4L9-201ENST00000449051 1259 ntBASIC28.11■■■□□ 2.09
RNF180Q86T96 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
RNF180Q86T96 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RNF180Q86T96 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
RNF180Q86T96 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.1■■■□□ 2.09
RNF180Q86T96 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.1■■■□□ 2.09
RNF180Q86T96 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.1■■■□□ 2.09
RNF180Q86T96 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.1■■■□□ 2.09
RNF180Q86T96 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
RNF180Q86T96 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
RNF180Q86T96 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.09■■■□□ 2.09
RNF180Q86T96 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC28.08■■■□□ 2.09
RNF180Q86T96 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
RNF180Q86T96 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
RNF180Q86T96 AC074183.2-201ENST00000623112 922 ntBASIC28.08■■■□□ 2.09
RNF180Q86T96 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
RNF180Q86T96 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
RNF180Q86T96 AC100797.4-201ENST00000631653 1827 ntBASIC28.08■■■□□ 2.09
RNF180Q86T96 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RNF180Q86T96 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.07■■■□□ 2.08
RNF180Q86T96 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
RNF180Q86T96 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
RNF180Q86T96 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.06■■■□□ 2.08
RNF180Q86T96 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RNF180Q86T96 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RNF180Q86T96 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.06■■■□□ 2.08
RNF180Q86T96 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
RNF180Q86T96 AC093536.1-201ENST00000569153 554 ntBASIC28.06■■■□□ 2.08
RNF180Q86T96 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RNF180Q86T96 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
RNF180Q86T96 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.04■■■□□ 2.08
RNF180Q86T96 AC010980.1-201ENST00000587192 1142 ntBASIC28.04■■■□□ 2.08
RNF180Q86T96 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RNF180Q86T96 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC28.03■■■□□ 2.08
RNF180Q86T96 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.03■■■□□ 2.08
RNF180Q86T96 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.03■■■□□ 2.08
RNF180Q86T96 RAP2CP1-202ENST00000605179 643 ntBASIC28.03■■■□□ 2.08
RNF180Q86T96 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
RNF180Q86T96 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
RNF180Q86T96 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
RNF180Q86T96 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
RNF180Q86T96 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC28.02■■■□□ 2.08
RNF180Q86T96 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.02■■■□□ 2.08
RNF180Q86T96 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
RNF180Q86T96 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
RNF180Q86T96 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RNF180Q86T96 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28■■■□□ 2.07
RNF180Q86T96 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC28■■■□□ 2.07
RNF180Q86T96 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
RNF180Q86T96 KRT8P33-201ENST00000508125 1423 ntBASIC28■■■□□ 2.07
RNF180Q86T96 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.99■■■□□ 2.07
RNF180Q86T96 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
RNF180Q86T96 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
RNF180Q86T96 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
RNF180Q86T96 AC139795.1-202ENST00000500444 432 ntBASIC27.99■■■□□ 2.07
RNF180Q86T96 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.99■■■□□ 2.07
RNF180Q86T96 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
RNF180Q86T96 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
RNF180Q86T96 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
RNF180Q86T96 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
RNF180Q86T96 SPCS2P3-201ENST00000500401 656 ntBASIC27.98■■■□□ 2.07
RNF180Q86T96 MIR3960-201ENST00000583311 91 ntBASIC27.98■■■□□ 2.07
RNF180Q86T96 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.98■■■□□ 2.07
RNF180Q86T96 ST7-AS1-201ENST00000456775 1889 ntBASIC27.98■■■□□ 2.07
RNF180Q86T96 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.97■■■□□ 2.07
RNF180Q86T96 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC27.97■■■□□ 2.07
RNF180Q86T96 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.97■■■□□ 2.07
RNF180Q86T96 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
RNF180Q86T96 MIR6765-201ENST00000614092 87 ntBASIC27.97■■■□□ 2.07
RNF180Q86T96 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.97■■■□□ 2.07
RNF180Q86T96 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RNF180Q86T96 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
RNF180Q86T96 YBX1P4-201ENST00000392794 808 ntBASIC27.95■■■□□ 2.06
RNF180Q86T96 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.95■■■□□ 2.06
RNF180Q86T96 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.95■■■□□ 2.06
RNF180Q86T96 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
RNF180Q86T96 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RNF180Q86T96 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
RNF180Q86T96 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC27.93■■■□□ 2.06
RNF180Q86T96 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.93■■■□□ 2.06
RNF180Q86T96 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.92■■■□□ 2.06
RNF180Q86T96 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
RNF180Q86T96 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RNF180Q86T96 AC009299.2-201ENST00000482477 511 ntBASIC27.92■■■□□ 2.06
RNF180Q86T96 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
RNF180Q86T96 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC27.91■■■□□ 2.06
RNF180Q86T96 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.91■■■□□ 2.06
RNF180Q86T96 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RNF180Q86T96 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RNF180Q86T96 AC018755.3-202ENST00000596210 929 ntBASIC27.91■■■□□ 2.06
RNF180Q86T96 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
RNF180Q86T96 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
RNF180Q86T96 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
RNF180Q86T96 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.9■■■□□ 2.06
RNF180Q86T96 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC27.9■■■□□ 2.06
RNF180Q86T96 AL592295.1-201ENST00000400984 884 ntBASIC27.9■■■□□ 2.06
RNF180Q86T96 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.89■■■□□ 2.06
RNF180Q86T96 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RNF180Q86T96 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RNF180Q86T96 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms