Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
COPS6Q7L5N1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.9■■■□□ 2.7
COPS6Q7L5N1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
COPS6Q7L5N1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
COPS6Q7L5N1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
COPS6Q7L5N1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
COPS6Q7L5N1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.89■■■□□ 2.7
COPS6Q7L5N1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
COPS6Q7L5N1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
COPS6Q7L5N1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
COPS6Q7L5N1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
COPS6Q7L5N1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
COPS6Q7L5N1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.87■■■□□ 2.69
COPS6Q7L5N1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
COPS6Q7L5N1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
COPS6Q7L5N1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
COPS6Q7L5N1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
COPS6Q7L5N1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.86■■■□□ 2.69
COPS6Q7L5N1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
COPS6Q7L5N1 AC139426.1-201ENST00000568218 2529 ntBASIC31.86■■■□□ 2.69
COPS6Q7L5N1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.86■■■□□ 2.69
COPS6Q7L5N1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
COPS6Q7L5N1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
COPS6Q7L5N1 AC012354.3-201ENST00000623734 483 ntBASIC31.84■■■□□ 2.69
COPS6Q7L5N1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.84■■■□□ 2.69
COPS6Q7L5N1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
COPS6Q7L5N1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.83■■■□□ 2.69
COPS6Q7L5N1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.69
COPS6Q7L5N1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
COPS6Q7L5N1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
COPS6Q7L5N1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.81■■■□□ 2.68
COPS6Q7L5N1 AC018358.1-201ENST00000631079 1402 ntBASIC31.81■■■□□ 2.68
COPS6Q7L5N1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
COPS6Q7L5N1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.8■■■□□ 2.68
COPS6Q7L5N1 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
COPS6Q7L5N1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
COPS6Q7L5N1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
COPS6Q7L5N1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
COPS6Q7L5N1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
COPS6Q7L5N1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.78■■■□□ 2.68
COPS6Q7L5N1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
COPS6Q7L5N1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
COPS6Q7L5N1 KRT18P60-201ENST00000312876 1297 ntBASIC31.77■■■□□ 2.68
COPS6Q7L5N1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.76■■■□□ 2.67
COPS6Q7L5N1 AC007029.1-201ENST00000604183 313 ntBASIC31.76■■■□□ 2.67
COPS6Q7L5N1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
COPS6Q7L5N1 SMPD5-203ENST00000639008 1464 ntBASIC31.76■■■□□ 2.67
COPS6Q7L5N1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
COPS6Q7L5N1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.75■■■□□ 2.67
COPS6Q7L5N1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
COPS6Q7L5N1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
COPS6Q7L5N1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.73■■■□□ 2.67
COPS6Q7L5N1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
COPS6Q7L5N1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
COPS6Q7L5N1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
COPS6Q7L5N1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
COPS6Q7L5N1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
COPS6Q7L5N1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
COPS6Q7L5N1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
COPS6Q7L5N1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
COPS6Q7L5N1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
COPS6Q7L5N1 AL033527.3-201ENST00000566366 1196 ntBASIC31.72■■■□□ 2.67
COPS6Q7L5N1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
COPS6Q7L5N1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
COPS6Q7L5N1 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.72■■■□□ 2.67
COPS6Q7L5N1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
COPS6Q7L5N1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
COPS6Q7L5N1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
COPS6Q7L5N1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.71■■■□□ 2.67
COPS6Q7L5N1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.7■■■□□ 2.67
COPS6Q7L5N1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.7■■■□□ 2.67
COPS6Q7L5N1 AC025884.2-201ENST00000553429 711 ntBASIC31.7■■■□□ 2.67
COPS6Q7L5N1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.7■■■□□ 2.66
COPS6Q7L5N1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.69■■■□□ 2.66
COPS6Q7L5N1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
COPS6Q7L5N1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.69■■■□□ 2.66
COPS6Q7L5N1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.69■■■□□ 2.66
COPS6Q7L5N1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
COPS6Q7L5N1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
COPS6Q7L5N1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
COPS6Q7L5N1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
COPS6Q7L5N1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
COPS6Q7L5N1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.68■■■□□ 2.66
COPS6Q7L5N1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.68■■■□□ 2.66
COPS6Q7L5N1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
COPS6Q7L5N1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
COPS6Q7L5N1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.67■■■□□ 2.66
COPS6Q7L5N1 AC009831.1-201ENST00000580420 1582 ntBASIC31.66■■■□□ 2.66
COPS6Q7L5N1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
COPS6Q7L5N1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
COPS6Q7L5N1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.65■■■□□ 2.66
COPS6Q7L5N1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
COPS6Q7L5N1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.65■■■□□ 2.66
COPS6Q7L5N1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
COPS6Q7L5N1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
COPS6Q7L5N1 AC004987.1-201ENST00000428627 508 ntBASIC31.65■■■□□ 2.66
COPS6Q7L5N1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
COPS6Q7L5N1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.65■■■□□ 2.66
COPS6Q7L5N1 DRD5P2-201ENST00000421395 2012 ntBASIC31.65■■■□□ 2.66
COPS6Q7L5N1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms