Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.6■■□□□ 1.05
COLCA1Q6ZS62 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COLCA1Q6ZS62 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
COLCA1Q6ZS62 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
COLCA1Q6ZS62 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.59■■□□□ 1.05
COLCA1Q6ZS62 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COLCA1Q6ZS62 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
COLCA1Q6ZS62 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
COLCA1Q6ZS62 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.58■■□□□ 1.05
COLCA1Q6ZS62 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
COLCA1Q6ZS62 MIR7108-201ENST00000614319 87 ntBASIC21.58■■□□□ 1.05
COLCA1Q6ZS62 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.04
COLCA1Q6ZS62 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COLCA1Q6ZS62 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.57■■□□□ 1.04
COLCA1Q6ZS62 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COLCA1Q6ZS62 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.57■■□□□ 1.04
COLCA1Q6ZS62 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COLCA1Q6ZS62 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.57■■□□□ 1.04
COLCA1Q6ZS62 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COLCA1Q6ZS62 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COLCA1Q6ZS62 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
COLCA1Q6ZS62 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
COLCA1Q6ZS62 HLA-V-202ENST00000446817 847 ntBASIC21.56■■□□□ 1.04
COLCA1Q6ZS62 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COLCA1Q6ZS62 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COLCA1Q6ZS62 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
COLCA1Q6ZS62 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COLCA1Q6ZS62 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.55■■□□□ 1.04
COLCA1Q6ZS62 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COLCA1Q6ZS62 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COLCA1Q6ZS62 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.55■■□□□ 1.04
COLCA1Q6ZS62 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
COLCA1Q6ZS62 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
COLCA1Q6ZS62 MIR219A2-201ENST00000608502 1504 ntBASIC21.55■■□□□ 1.04
COLCA1Q6ZS62 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COLCA1Q6ZS62 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.54■■□□□ 1.04
COLCA1Q6ZS62 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
COLCA1Q6ZS62 AC016575.1-201ENST00000607026 382 ntBASIC21.54■■□□□ 1.04
COLCA1Q6ZS62 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
COLCA1Q6ZS62 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COLCA1Q6ZS62 WHAMMP3-201ENST00000611636 1609 ntBASIC21.53■■□□□ 1.04
COLCA1Q6ZS62 AL449106.1-201ENST00000608517 1980 ntBASIC21.53■■□□□ 1.04
COLCA1Q6ZS62 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
COLCA1Q6ZS62 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
COLCA1Q6ZS62 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COLCA1Q6ZS62 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COLCA1Q6ZS62 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COLCA1Q6ZS62 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.52■■□□□ 1.04
COLCA1Q6ZS62 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COLCA1Q6ZS62 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COLCA1Q6ZS62 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
COLCA1Q6ZS62 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COLCA1Q6ZS62 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
COLCA1Q6ZS62 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COLCA1Q6ZS62 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COLCA1Q6ZS62 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COLCA1Q6ZS62 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.49■■□□□ 1.03
COLCA1Q6ZS62 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COLCA1Q6ZS62 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.48■■□□□ 1.03
COLCA1Q6ZS62 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
COLCA1Q6ZS62 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.48■■□□□ 1.03
COLCA1Q6ZS62 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COLCA1Q6ZS62 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COLCA1Q6ZS62 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COLCA1Q6ZS62 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.47■■□□□ 1.03
COLCA1Q6ZS62 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.47■■□□□ 1.03
COLCA1Q6ZS62 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
COLCA1Q6ZS62 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
COLCA1Q6ZS62 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COLCA1Q6ZS62 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COLCA1Q6ZS62 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
COLCA1Q6ZS62 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COLCA1Q6ZS62 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COLCA1Q6ZS62 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.46■■□□□ 1.03
COLCA1Q6ZS62 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COLCA1Q6ZS62 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
COLCA1Q6ZS62 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COLCA1Q6ZS62 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
COLCA1Q6ZS62 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.46■■□□□ 1.03
COLCA1Q6ZS62 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COLCA1Q6ZS62 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COLCA1Q6ZS62 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.45■■□□□ 1.02
COLCA1Q6ZS62 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.45■■□□□ 1.02
COLCA1Q6ZS62 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COLCA1Q6ZS62 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.45■■□□□ 1.02
COLCA1Q6ZS62 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.44■■□□□ 1.02
COLCA1Q6ZS62 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COLCA1Q6ZS62 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.44■■□□□ 1.02
COLCA1Q6ZS62 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.44■■□□□ 1.02
COLCA1Q6ZS62 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
COLCA1Q6ZS62 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COLCA1Q6ZS62 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COLCA1Q6ZS62 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COLCA1Q6ZS62 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
COLCA1Q6ZS62 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COLCA1Q6ZS62 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.43■■□□□ 1.02
COLCA1Q6ZS62 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
COLCA1Q6ZS62 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COLCA1Q6ZS62 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COLCA1Q6ZS62 MIR639-201ENST00000384974 98 ntBASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms