Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.49■■■□□ 2.63
PRPF40BQ6NWY9 DUX4L18-201ENST00000553347 1267 ntBASIC31.49■■■□□ 2.63
PRPF40BQ6NWY9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PRPF40BQ6NWY9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
PRPF40BQ6NWY9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PRPF40BQ6NWY9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
PRPF40BQ6NWY9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
PRPF40BQ6NWY9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.47■■■□□ 2.63
PRPF40BQ6NWY9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
PRPF40BQ6NWY9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.47■■■□□ 2.63
PRPF40BQ6NWY9 AL592293.1-201ENST00000502889 1188 ntBASIC31.47■■■□□ 2.63
PRPF40BQ6NWY9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
PRPF40BQ6NWY9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PRPF40BQ6NWY9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
PRPF40BQ6NWY9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PRPF40BQ6NWY9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PRPF40BQ6NWY9 AC009831.1-201ENST00000580420 1582 ntBASIC31.46■■■□□ 2.63
PRPF40BQ6NWY9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
PRPF40BQ6NWY9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.45■■■□□ 2.63
PRPF40BQ6NWY9 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PRPF40BQ6NWY9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PRPF40BQ6NWY9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
PRPF40BQ6NWY9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.45■■■□□ 2.63
PRPF40BQ6NWY9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
PRPF40BQ6NWY9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
PRPF40BQ6NWY9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
PRPF40BQ6NWY9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.44■■■□□ 2.62
PRPF40BQ6NWY9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
PRPF40BQ6NWY9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PRPF40BQ6NWY9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PRPF40BQ6NWY9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.43■■■□□ 2.62
PRPF40BQ6NWY9 AL035685.1-201ENST00000636663 812 ntBASIC31.43■■■□□ 2.62
PRPF40BQ6NWY9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.43■■■□□ 2.62
PRPF40BQ6NWY9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
PRPF40BQ6NWY9 AC133552.2-201ENST00000619106 1032 ntBASIC31.42■■■□□ 2.62
PRPF40BQ6NWY9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.42■■■□□ 2.62
PRPF40BQ6NWY9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PRPF40BQ6NWY9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.4■■■□□ 2.62
PRPF40BQ6NWY9 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
PRPF40BQ6NWY9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
PRPF40BQ6NWY9 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.4■■■□□ 2.62
PRPF40BQ6NWY9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PRPF40BQ6NWY9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PRPF40BQ6NWY9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PRPF40BQ6NWY9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
PRPF40BQ6NWY9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.39■■■□□ 2.62
PRPF40BQ6NWY9 AL451085.2-201ENST00000605085 799 ntBASIC31.39■■■□□ 2.62
PRPF40BQ6NWY9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PRPF40BQ6NWY9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PRPF40BQ6NWY9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
PRPF40BQ6NWY9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PRPF40BQ6NWY9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PRPF40BQ6NWY9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.37■■■□□ 2.61
PRPF40BQ6NWY9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PRPF40BQ6NWY9 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PRPF40BQ6NWY9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
PRPF40BQ6NWY9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PRPF40BQ6NWY9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PRPF40BQ6NWY9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
PRPF40BQ6NWY9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
PRPF40BQ6NWY9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
PRPF40BQ6NWY9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.35■■■□□ 2.61
PRPF40BQ6NWY9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PRPF40BQ6NWY9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
PRPF40BQ6NWY9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PRPF40BQ6NWY9 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PRPF40BQ6NWY9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.34■■■□□ 2.61
PRPF40BQ6NWY9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.34■■■□□ 2.61
PRPF40BQ6NWY9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PRPF40BQ6NWY9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PRPF40BQ6NWY9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
PRPF40BQ6NWY9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
PRPF40BQ6NWY9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
PRPF40BQ6NWY9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.31■■■□□ 2.6
PRPF40BQ6NWY9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PRPF40BQ6NWY9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
PRPF40BQ6NWY9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PRPF40BQ6NWY9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.3■■■□□ 2.6
PRPF40BQ6NWY9 SMPD5-203ENST00000639008 1464 ntBASIC31.3■■■□□ 2.6
PRPF40BQ6NWY9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.3■■■□□ 2.6
PRPF40BQ6NWY9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PRPF40BQ6NWY9 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PRPF40BQ6NWY9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
PRPF40BQ6NWY9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PRPF40BQ6NWY9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.29■■■□□ 2.6
PRPF40BQ6NWY9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
PRPF40BQ6NWY9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.28■■■□□ 2.6
PRPF40BQ6NWY9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
PRPF40BQ6NWY9 AC026202.3-201ENST00000600805 1127 ntBASIC31.28■■■□□ 2.6
PRPF40BQ6NWY9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.28■■■□□ 2.6
PRPF40BQ6NWY9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.28■■■□□ 2.6
PRPF40BQ6NWY9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
PRPF40BQ6NWY9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.27■■■□□ 2.6
PRPF40BQ6NWY9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PRPF40BQ6NWY9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.26■■■□□ 2.59
PRPF40BQ6NWY9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PRPF40BQ6NWY9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PRPF40BQ6NWY9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
PRPF40BQ6NWY9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.25■■■□□ 2.59
PRPF40BQ6NWY9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms