Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.96■■■□□ 2.71
USPL1Q5W0Q7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
USPL1Q5W0Q7 AL359258.2-201ENST00000564063 1566 ntBASIC31.96■■■□□ 2.71
USPL1Q5W0Q7 AC026202.3-201ENST00000600805 1127 ntBASIC31.96■■■□□ 2.71
USPL1Q5W0Q7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.96■■■□□ 2.71
USPL1Q5W0Q7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.96■■■□□ 2.71
USPL1Q5W0Q7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
USPL1Q5W0Q7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
USPL1Q5W0Q7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
USPL1Q5W0Q7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
USPL1Q5W0Q7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
USPL1Q5W0Q7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.95■■■□□ 2.71
USPL1Q5W0Q7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.95■■■□□ 2.7
USPL1Q5W0Q7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.95■■■□□ 2.7
USPL1Q5W0Q7 AC100797.4-201ENST00000631653 1827 ntBASIC31.94■■■□□ 2.7
USPL1Q5W0Q7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.94■■■□□ 2.7
USPL1Q5W0Q7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
USPL1Q5W0Q7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
USPL1Q5W0Q7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.92■■■□□ 2.7
USPL1Q5W0Q7 AL451085.2-201ENST00000605085 799 ntBASIC31.92■■■□□ 2.7
USPL1Q5W0Q7 AL035685.1-201ENST00000636663 812 ntBASIC31.92■■■□□ 2.7
USPL1Q5W0Q7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
USPL1Q5W0Q7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
USPL1Q5W0Q7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.91■■■□□ 2.7
USPL1Q5W0Q7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
USPL1Q5W0Q7 AP004833.2-201ENST00000532228 1454 ntBASIC31.9■■■□□ 2.7
USPL1Q5W0Q7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
USPL1Q5W0Q7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
USPL1Q5W0Q7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
USPL1Q5W0Q7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
USPL1Q5W0Q7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
USPL1Q5W0Q7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.87■■■□□ 2.69
USPL1Q5W0Q7 AC025884.2-201ENST00000553429 711 ntBASIC31.87■■■□□ 2.69
USPL1Q5W0Q7 ST7-AS1-201ENST00000456775 1889 ntBASIC31.86■■■□□ 2.69
USPL1Q5W0Q7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
USPL1Q5W0Q7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.86■■■□□ 2.69
USPL1Q5W0Q7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.86■■■□□ 2.69
USPL1Q5W0Q7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
USPL1Q5W0Q7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
USPL1Q5W0Q7 DUX4L9-201ENST00000449051 1259 ntBASIC31.86■■■□□ 2.69
USPL1Q5W0Q7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
USPL1Q5W0Q7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.85■■■□□ 2.69
USPL1Q5W0Q7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.85■■■□□ 2.69
USPL1Q5W0Q7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
USPL1Q5W0Q7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
USPL1Q5W0Q7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.84■■■□□ 2.69
USPL1Q5W0Q7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
USPL1Q5W0Q7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
USPL1Q5W0Q7 ABCB10P1-201ENST00000614297 2181 ntBASIC31.84■■■□□ 2.69
USPL1Q5W0Q7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.84■■■□□ 2.69
USPL1Q5W0Q7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
USPL1Q5W0Q7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.83■■■□□ 2.69
USPL1Q5W0Q7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.83■■■□□ 2.69
USPL1Q5W0Q7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
USPL1Q5W0Q7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC31.83■■■□□ 2.69
USPL1Q5W0Q7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
USPL1Q5W0Q7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
USPL1Q5W0Q7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
USPL1Q5W0Q7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
USPL1Q5W0Q7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
USPL1Q5W0Q7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
USPL1Q5W0Q7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC31.82■■■□□ 2.68
USPL1Q5W0Q7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.82■■■□□ 2.68
USPL1Q5W0Q7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.81■■■□□ 2.68
USPL1Q5W0Q7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.8■■■□□ 2.68
USPL1Q5W0Q7 RP9P-202ENST00000450133 1212 ntBASIC31.8■■■□□ 2.68
USPL1Q5W0Q7 SPCS2P3-201ENST00000500401 656 ntBASIC31.8■■■□□ 2.68
USPL1Q5W0Q7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.8■■■□□ 2.68
USPL1Q5W0Q7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
USPL1Q5W0Q7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.79■■■□□ 2.68
USPL1Q5W0Q7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
USPL1Q5W0Q7 AC093536.1-201ENST00000569153 554 ntBASIC31.78■■■□□ 2.68
USPL1Q5W0Q7 AC010980.1-201ENST00000587192 1142 ntBASIC31.78■■■□□ 2.68
USPL1Q5W0Q7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
USPL1Q5W0Q7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.78■■■□□ 2.68
USPL1Q5W0Q7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.78■■■□□ 2.68
USPL1Q5W0Q7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.78■■■□□ 2.68
USPL1Q5W0Q7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
USPL1Q5W0Q7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC31.77■■■□□ 2.68
USPL1Q5W0Q7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.77■■■□□ 2.68
USPL1Q5W0Q7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.77■■■□□ 2.68
USPL1Q5W0Q7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
USPL1Q5W0Q7 RAP2CP1-202ENST00000605179 643 ntBASIC31.76■■■□□ 2.67
USPL1Q5W0Q7 BHLHE23-202ENST00000612929 1109 ntBASIC31.76■■■□□ 2.67
USPL1Q5W0Q7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
USPL1Q5W0Q7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
USPL1Q5W0Q7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
USPL1Q5W0Q7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
USPL1Q5W0Q7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
USPL1Q5W0Q7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
USPL1Q5W0Q7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
USPL1Q5W0Q7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.74■■■□□ 2.67
USPL1Q5W0Q7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
USPL1Q5W0Q7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
USPL1Q5W0Q7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.74■■■□□ 2.67
USPL1Q5W0Q7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.73■■■□□ 2.67
USPL1Q5W0Q7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.73■■■□□ 2.67
USPL1Q5W0Q7 KRT8P33-201ENST00000508125 1423 ntBASIC31.73■■■□□ 2.67
USPL1Q5W0Q7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
USPL1Q5W0Q7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms