Protein–RNA interactions for Protein: Q5T4J0

GCNT6, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 6, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT6Q5T4J0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
GCNT6Q5T4J0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
GCNT6Q5T4J0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GCNT6Q5T4J0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GCNT6Q5T4J0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
GCNT6Q5T4J0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
GCNT6Q5T4J0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.32■■□□□ 1.32
GCNT6Q5T4J0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.32■■□□□ 1.32
GCNT6Q5T4J0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
GCNT6Q5T4J0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
GCNT6Q5T4J0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
GCNT6Q5T4J0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
GCNT6Q5T4J0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.28■■□□□ 1.32
GCNT6Q5T4J0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.28■■□□□ 1.32
GCNT6Q5T4J0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
GCNT6Q5T4J0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
GCNT6Q5T4J0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
GCNT6Q5T4J0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
GCNT6Q5T4J0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
GCNT6Q5T4J0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
GCNT6Q5T4J0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.27■■□□□ 1.32
GCNT6Q5T4J0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
GCNT6Q5T4J0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
GCNT6Q5T4J0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.27■■□□□ 1.32
GCNT6Q5T4J0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
GCNT6Q5T4J0 AP004609.3-201ENST00000610705 1884 ntBASIC23.26■■□□□ 1.31
GCNT6Q5T4J0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
GCNT6Q5T4J0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
GCNT6Q5T4J0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
GCNT6Q5T4J0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
GCNT6Q5T4J0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
GCNT6Q5T4J0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
GCNT6Q5T4J0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
GCNT6Q5T4J0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.25■■□□□ 1.31
GCNT6Q5T4J0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.25■■□□□ 1.31
GCNT6Q5T4J0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.24■■□□□ 1.31
GCNT6Q5T4J0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
GCNT6Q5T4J0 AC145676.1-201ENST00000514988 2004 ntBASIC23.24■■□□□ 1.31
GCNT6Q5T4J0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
GCNT6Q5T4J0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
GCNT6Q5T4J0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
GCNT6Q5T4J0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
GCNT6Q5T4J0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.23■■□□□ 1.31
GCNT6Q5T4J0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.23■■□□□ 1.31
GCNT6Q5T4J0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
GCNT6Q5T4J0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.22■■□□□ 1.31
GCNT6Q5T4J0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
GCNT6Q5T4J0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.22■■□□□ 1.31
GCNT6Q5T4J0 AC021231.2-201ENST00000594613 730 ntBASIC23.22■■□□□ 1.31
GCNT6Q5T4J0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
GCNT6Q5T4J0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
GCNT6Q5T4J0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
GCNT6Q5T4J0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
GCNT6Q5T4J0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
GCNT6Q5T4J0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
GCNT6Q5T4J0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.21■■□□□ 1.31
GCNT6Q5T4J0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GCNT6Q5T4J0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
GCNT6Q5T4J0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
GCNT6Q5T4J0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
GCNT6Q5T4J0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
GCNT6Q5T4J0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
GCNT6Q5T4J0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
GCNT6Q5T4J0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.18■■□□□ 1.3
GCNT6Q5T4J0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
GCNT6Q5T4J0 DUX4L29-201ENST00000425409 679 ntBASIC23.18■■□□□ 1.3
GCNT6Q5T4J0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.17■■□□□ 1.3
GCNT6Q5T4J0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
GCNT6Q5T4J0 WHAMMP3-201ENST00000611636 1609 ntBASIC23.16■■□□□ 1.3
GCNT6Q5T4J0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.16■■□□□ 1.3
GCNT6Q5T4J0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.16■■□□□ 1.3
GCNT6Q5T4J0 AC142472.1-201ENST00000612013 1741 ntBASIC23.16■■□□□ 1.3
GCNT6Q5T4J0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.16■■□□□ 1.3
GCNT6Q5T4J0 AC092803.2-201ENST00000564287 1899 ntBASIC23.15■■□□□ 1.3
GCNT6Q5T4J0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
GCNT6Q5T4J0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
GCNT6Q5T4J0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
GCNT6Q5T4J0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
GCNT6Q5T4J0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.14■■□□□ 1.29
GCNT6Q5T4J0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
GCNT6Q5T4J0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
GCNT6Q5T4J0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
GCNT6Q5T4J0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.13■■□□□ 1.29
GCNT6Q5T4J0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
GCNT6Q5T4J0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
GCNT6Q5T4J0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
GCNT6Q5T4J0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
GCNT6Q5T4J0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
GCNT6Q5T4J0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
GCNT6Q5T4J0 DUSP8P4-201ENST00000399538 1761 ntBASIC23.12■■□□□ 1.29
GCNT6Q5T4J0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
GCNT6Q5T4J0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
GCNT6Q5T4J0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.11■■□□□ 1.29
GCNT6Q5T4J0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
GCNT6Q5T4J0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.1■■□□□ 1.29
GCNT6Q5T4J0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.1■■□□□ 1.29
GCNT6Q5T4J0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
GCNT6Q5T4J0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
GCNT6Q5T4J0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
GCNT6Q5T4J0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms