Protein–RNA interactions for Protein: Q5R3I4

TTC38, Tetratricopeptide repeat protein 38, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38Q5R3I4 AC008813.1-201ENST00000536597 885 ntBASIC28.49■■■□□ 2.15
TTC38Q5R3I4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
TTC38Q5R3I4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TTC38Q5R3I4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TTC38Q5R3I4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
TTC38Q5R3I4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
TTC38Q5R3I4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.47■■■□□ 2.15
TTC38Q5R3I4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
TTC38Q5R3I4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.47■■■□□ 2.15
TTC38Q5R3I4 HLA-V-202ENST00000446817 847 ntBASIC28.46■■■□□ 2.15
TTC38Q5R3I4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
TTC38Q5R3I4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.46■■■□□ 2.15
TTC38Q5R3I4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.15
TTC38Q5R3I4 AC016575.1-201ENST00000607026 382 ntBASIC28.45■■■□□ 2.14
TTC38Q5R3I4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.45■■■□□ 2.14
TTC38Q5R3I4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
TTC38Q5R3I4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
TTC38Q5R3I4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TTC38Q5R3I4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.44■■■□□ 2.14
TTC38Q5R3I4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TTC38Q5R3I4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
TTC38Q5R3I4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
TTC38Q5R3I4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TTC38Q5R3I4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TTC38Q5R3I4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.42■■■□□ 2.14
TTC38Q5R3I4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.41■■■□□ 2.14
TTC38Q5R3I4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TTC38Q5R3I4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.41■■■□□ 2.14
TTC38Q5R3I4 AC148477.6-201ENST00000623746 465 ntBASIC28.41■■■□□ 2.14
TTC38Q5R3I4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TTC38Q5R3I4 MIR219A2-201ENST00000608502 1504 ntBASIC28.4■■■□□ 2.14
TTC38Q5R3I4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
TTC38Q5R3I4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
TTC38Q5R3I4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
TTC38Q5R3I4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TTC38Q5R3I4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.39■■■□□ 2.13
TTC38Q5R3I4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
TTC38Q5R3I4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TTC38Q5R3I4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.38■■■□□ 2.13
TTC38Q5R3I4 AL449106.1-201ENST00000608517 1980 ntBASIC28.38■■■□□ 2.13
TTC38Q5R3I4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TTC38Q5R3I4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
TTC38Q5R3I4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.37■■■□□ 2.13
TTC38Q5R3I4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.37■■■□□ 2.13
TTC38Q5R3I4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.37■■■□□ 2.13
TTC38Q5R3I4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TTC38Q5R3I4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
TTC38Q5R3I4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TTC38Q5R3I4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.36■■■□□ 2.13
TTC38Q5R3I4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
TTC38Q5R3I4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
TTC38Q5R3I4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.36■■■□□ 2.13
TTC38Q5R3I4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.36■■■□□ 2.13
TTC38Q5R3I4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.36■■■□□ 2.13
TTC38Q5R3I4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
TTC38Q5R3I4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
TTC38Q5R3I4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.36■■■□□ 2.13
TTC38Q5R3I4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TTC38Q5R3I4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.36■■■□□ 2.13
TTC38Q5R3I4 WHAMMP3-201ENST00000611636 1609 ntBASIC28.36■■■□□ 2.13
TTC38Q5R3I4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TTC38Q5R3I4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TTC38Q5R3I4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
TTC38Q5R3I4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.35■■■□□ 2.13
TTC38Q5R3I4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TTC38Q5R3I4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.34■■■□□ 2.13
TTC38Q5R3I4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TTC38Q5R3I4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.33■■■□□ 2.13
TTC38Q5R3I4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.33■■■□□ 2.13
TTC38Q5R3I4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.33■■■□□ 2.13
TTC38Q5R3I4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TTC38Q5R3I4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TTC38Q5R3I4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TTC38Q5R3I4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TTC38Q5R3I4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.31■■■□□ 2.12
TTC38Q5R3I4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TTC38Q5R3I4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.3■■■□□ 2.12
TTC38Q5R3I4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TTC38Q5R3I4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TTC38Q5R3I4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
TTC38Q5R3I4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TTC38Q5R3I4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TTC38Q5R3I4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TTC38Q5R3I4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
TTC38Q5R3I4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
TTC38Q5R3I4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.28■■■□□ 2.12
TTC38Q5R3I4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.28■■■□□ 2.12
TTC38Q5R3I4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.28■■■□□ 2.12
TTC38Q5R3I4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.28■■■□□ 2.12
TTC38Q5R3I4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TTC38Q5R3I4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TTC38Q5R3I4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TTC38Q5R3I4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
TTC38Q5R3I4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TTC38Q5R3I4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
TTC38Q5R3I4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
TTC38Q5R3I4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
TTC38Q5R3I4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.26■■■□□ 2.11
TTC38Q5R3I4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
TTC38Q5R3I4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms