Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
CBWD3Q5JTY5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
CBWD3Q5JTY5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CBWD3Q5JTY5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CBWD3Q5JTY5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CBWD3Q5JTY5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CBWD3Q5JTY5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.08■■□□□ 1.93
CBWD3Q5JTY5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.08■■□□□ 1.93
CBWD3Q5JTY5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
CBWD3Q5JTY5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CBWD3Q5JTY5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CBWD3Q5JTY5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
CBWD3Q5JTY5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CBWD3Q5JTY5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CBWD3Q5JTY5 MIR3648-2-201ENST00000581792 180 ntBASIC27.07■■□□□ 1.92
CBWD3Q5JTY5 MIR3648-1-201ENST00000615959 180 ntBASIC27.07■■□□□ 1.92
CBWD3Q5JTY5 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CBWD3Q5JTY5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.06■■□□□ 1.92
CBWD3Q5JTY5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CBWD3Q5JTY5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
CBWD3Q5JTY5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.06■■□□□ 1.92
CBWD3Q5JTY5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.05■■□□□ 1.92
CBWD3Q5JTY5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
CBWD3Q5JTY5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.05■■□□□ 1.92
CBWD3Q5JTY5 MIR7108-201ENST00000614319 87 ntBASIC27.05■■□□□ 1.92
CBWD3Q5JTY5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.05■■□□□ 1.92
CBWD3Q5JTY5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
CBWD3Q5JTY5 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CBWD3Q5JTY5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CBWD3Q5JTY5 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CBWD3Q5JTY5 HLA-V-202ENST00000446817 847 ntBASIC27.04■■□□□ 1.92
CBWD3Q5JTY5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CBWD3Q5JTY5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.03■■□□□ 1.92
CBWD3Q5JTY5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CBWD3Q5JTY5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
CBWD3Q5JTY5 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.03■■□□□ 1.92
CBWD3Q5JTY5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.02■■□□□ 1.92
CBWD3Q5JTY5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CBWD3Q5JTY5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
CBWD3Q5JTY5 AC008813.1-201ENST00000536597 885 ntBASIC27.02■■□□□ 1.92
CBWD3Q5JTY5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.02■■□□□ 1.92
CBWD3Q5JTY5 AL449106.1-201ENST00000608517 1980 ntBASIC27.02■■□□□ 1.92
CBWD3Q5JTY5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
CBWD3Q5JTY5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CBWD3Q5JTY5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CBWD3Q5JTY5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CBWD3Q5JTY5 AC016575.1-201ENST00000607026 382 ntBASIC27■■□□□ 1.91
CBWD3Q5JTY5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
CBWD3Q5JTY5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
CBWD3Q5JTY5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CBWD3Q5JTY5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
CBWD3Q5JTY5 MIR219A2-201ENST00000608502 1504 ntBASIC26.98■■□□□ 1.91
CBWD3Q5JTY5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.98■■□□□ 1.91
CBWD3Q5JTY5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CBWD3Q5JTY5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.96■■□□□ 1.91
CBWD3Q5JTY5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.96■■□□□ 1.91
CBWD3Q5JTY5 AC148477.6-201ENST00000623746 465 ntBASIC26.96■■□□□ 1.91
CBWD3Q5JTY5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CBWD3Q5JTY5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.96■■□□□ 1.91
CBWD3Q5JTY5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.95■■□□□ 1.91
CBWD3Q5JTY5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.95■■□□□ 1.91
CBWD3Q5JTY5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
CBWD3Q5JTY5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.95■■□□□ 1.91
CBWD3Q5JTY5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.95■■□□□ 1.9
CBWD3Q5JTY5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.95■■□□□ 1.9
CBWD3Q5JTY5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.95■■□□□ 1.9
CBWD3Q5JTY5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CBWD3Q5JTY5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CBWD3Q5JTY5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CBWD3Q5JTY5 WHAMMP3-201ENST00000611636 1609 ntBASIC26.94■■□□□ 1.9
CBWD3Q5JTY5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
CBWD3Q5JTY5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CBWD3Q5JTY5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CBWD3Q5JTY5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.93■■□□□ 1.9
CBWD3Q5JTY5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.93■■□□□ 1.9
CBWD3Q5JTY5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CBWD3Q5JTY5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
CBWD3Q5JTY5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.92■■□□□ 1.9
CBWD3Q5JTY5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.92■■□□□ 1.9
CBWD3Q5JTY5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.92■■□□□ 1.9
CBWD3Q5JTY5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
CBWD3Q5JTY5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
CBWD3Q5JTY5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.91■■□□□ 1.9
CBWD3Q5JTY5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CBWD3Q5JTY5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.9■■□□□ 1.9
CBWD3Q5JTY5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CBWD3Q5JTY5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CBWD3Q5JTY5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
CBWD3Q5JTY5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CBWD3Q5JTY5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CBWD3Q5JTY5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CBWD3Q5JTY5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CBWD3Q5JTY5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.88■■□□□ 1.89
CBWD3Q5JTY5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CBWD3Q5JTY5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CBWD3Q5JTY5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CBWD3Q5JTY5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
CBWD3Q5JTY5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CBWD3Q5JTY5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CBWD3Q5JTY5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms