Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC01554Q52M75 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01554Q52M75 SLC25A24-204ENST00000569674 2357 ntBASIC12.43□□□□□ -0.42
LINC01554Q52M75 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC01554Q52M75 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
LINC01554Q52M75 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01554Q52M75 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01554Q52M75 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01554Q52M75 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
LINC01554Q52M75 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC01554Q52M75 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC01554Q52M75 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01554Q52M75 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01554Q52M75 MED17-221ENST00000639724 2317 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC01554Q52M75 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01554Q52M75 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01554Q52M75 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01554Q52M75 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01554Q52M75 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01554Q52M75 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC01554Q52M75 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01554Q52M75 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LINC01554Q52M75 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LINC01554Q52M75 TMEM202-AS1-202ENST00000565181 2325 ntBASIC12.4□□□□□ -0.42
LINC01554Q52M75 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01554Q52M75 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
LINC01554Q52M75 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01554Q52M75 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC12.4□□□□□ -0.42
LINC01554Q52M75 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01554Q52M75 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01554Q52M75 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01554Q52M75 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01554Q52M75 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01554Q52M75 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01554Q52M75 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
LINC01554Q52M75 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
LINC01554Q52M75 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC12.4□□□□□ -0.42
LINC01554Q52M75 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
LINC01554Q52M75 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
LINC01554Q52M75 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
LINC01554Q52M75 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01554Q52M75 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01554Q52M75 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01554Q52M75 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC12.39□□□□□ -0.43
LINC01554Q52M75 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01554Q52M75 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01554Q52M75 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01554Q52M75 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LINC01554Q52M75 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC12.39□□□□□ -0.43
LINC01554Q52M75 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LINC01554Q52M75 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC12.39□□□□□ -0.43
LINC01554Q52M75 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01554Q52M75 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01554Q52M75 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01554Q52M75 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01554Q52M75 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC12.38□□□□□ -0.43
LINC01554Q52M75 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LINC01554Q52M75 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC12.38□□□□□ -0.43
LINC01554Q52M75 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01554Q52M75 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC12.37□□□□□ -0.43
LINC01554Q52M75 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC01554Q52M75 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LINC01554Q52M75 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC12.37□□□□□ -0.43
LINC01554Q52M75 PKD1P6-201ENST00000343738 4769 ntBASIC12.37□□□□□ -0.43
LINC01554Q52M75 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
LINC01554Q52M75 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01554Q52M75 AL121749.1-202ENST00000609313 2153 ntBASIC12.36□□□□□ -0.43
LINC01554Q52M75 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01554Q52M75 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01554Q52M75 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01554Q52M75 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LINC01554Q52M75 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LINC01554Q52M75 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01554Q52M75 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
LINC01554Q52M75 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC12.35□□□□□ -0.43
LINC01554Q52M75 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01554Q52M75 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01554Q52M75 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
LINC01554Q52M75 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01554Q52M75 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01554Q52M75 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC12.35□□□□□ -0.43
LINC01554Q52M75 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01554Q52M75 AC120057.4-201ENST00000624722 1615 ntBASIC12.35□□□□□ -0.43
LINC01554Q52M75 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01554Q52M75 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
LINC01554Q52M75 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC12.34□□□□□ -0.43
LINC01554Q52M75 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01554Q52M75 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01554Q52M75 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01554Q52M75 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01554Q52M75 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01554Q52M75 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01554Q52M75 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01554Q52M75 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
LINC01554Q52M75 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01554Q52M75 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01554Q52M75 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01554Q52M75 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
LINC01554Q52M75 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01554Q52M75 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms