Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC060814.1-201ENST00000554326 538 ntBASIC28.92■■■□□ 2.22
CCDC144BQ3MJ40 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.91■■■□□ 2.22
CCDC144BQ3MJ40 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.91■■■□□ 2.22
CCDC144BQ3MJ40 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.91■■■□□ 2.22
CCDC144BQ3MJ40 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
CCDC144BQ3MJ40 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.9■■■□□ 2.22
CCDC144BQ3MJ40 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCDC144BQ3MJ40 AC012354.3-201ENST00000623734 483 ntBASIC28.9■■■□□ 2.22
CCDC144BQ3MJ40 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCDC144BQ3MJ40 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCDC144BQ3MJ40 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCDC144BQ3MJ40 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
CCDC144BQ3MJ40 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.89■■■□□ 2.22
CCDC144BQ3MJ40 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
CCDC144BQ3MJ40 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.89■■■□□ 2.22
CCDC144BQ3MJ40 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
CCDC144BQ3MJ40 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.22
CCDC144BQ3MJ40 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
CCDC144BQ3MJ40 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.89■■■□□ 2.21
CCDC144BQ3MJ40 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CCDC144BQ3MJ40 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.88■■■□□ 2.21
CCDC144BQ3MJ40 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
CCDC144BQ3MJ40 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.88■■■□□ 2.21
CCDC144BQ3MJ40 MIR219A2-201ENST00000608502 1504 ntBASIC28.88■■■□□ 2.21
CCDC144BQ3MJ40 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
CCDC144BQ3MJ40 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
CCDC144BQ3MJ40 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
CCDC144BQ3MJ40 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
CCDC144BQ3MJ40 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
CCDC144BQ3MJ40 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
CCDC144BQ3MJ40 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CCDC144BQ3MJ40 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
CCDC144BQ3MJ40 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CCDC144BQ3MJ40 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.85■■■□□ 2.21
CCDC144BQ3MJ40 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
CCDC144BQ3MJ40 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CCDC144BQ3MJ40 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CCDC144BQ3MJ40 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
CCDC144BQ3MJ40 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CCDC144BQ3MJ40 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CCDC144BQ3MJ40 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CCDC144BQ3MJ40 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CCDC144BQ3MJ40 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.82■■■□□ 2.2
CCDC144BQ3MJ40 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.82■■■□□ 2.2
CCDC144BQ3MJ40 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CCDC144BQ3MJ40 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
CCDC144BQ3MJ40 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
CCDC144BQ3MJ40 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 U85056.1-201ENST00000616429 682 ntBASIC28.81■■■□□ 2.2
CCDC144BQ3MJ40 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
CCDC144BQ3MJ40 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.8■■■□□ 2.2
CCDC144BQ3MJ40 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.8■■■□□ 2.2
CCDC144BQ3MJ40 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CCDC144BQ3MJ40 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC144BQ3MJ40 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC144BQ3MJ40 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC144BQ3MJ40 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC144BQ3MJ40 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.78■■■□□ 2.2
CCDC144BQ3MJ40 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.78■■■□□ 2.2
CCDC144BQ3MJ40 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.78■■■□□ 2.2
CCDC144BQ3MJ40 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CCDC144BQ3MJ40 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC144BQ3MJ40 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC144BQ3MJ40 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC144BQ3MJ40 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC144BQ3MJ40 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC144BQ3MJ40 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC144BQ3MJ40 AC092296.2-201ENST00000589470 999 ntBASIC28.76■■■□□ 2.19
CCDC144BQ3MJ40 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
CCDC144BQ3MJ40 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
CCDC144BQ3MJ40 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CCDC144BQ3MJ40 AC018358.1-201ENST00000631079 1402 ntBASIC28.75■■■□□ 2.19
CCDC144BQ3MJ40 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 AL033527.3-201ENST00000566366 1196 ntBASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 SHF-207ENST00000560540 2062 ntTSL 5 BASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CCDC144BQ3MJ40 AC135731.1-201ENST00000569415 2548 ntBASIC28.73■■■□□ 2.19
CCDC144BQ3MJ40 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC144BQ3MJ40 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
CCDC144BQ3MJ40 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.73■■■□□ 2.19
CCDC144BQ3MJ40 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.73■■■□□ 2.19
CCDC144BQ3MJ40 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
CCDC144BQ3MJ40 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC144BQ3MJ40 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCDC144BQ3MJ40 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCDC144BQ3MJ40 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCDC144BQ3MJ40 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
CCDC144BQ3MJ40 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.72■■■□□ 2.19
CCDC144BQ3MJ40 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.72■■■□□ 2.19
CCDC144BQ3MJ40 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.71■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms