Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 PAC10YGR078C 600 nt7.58□□□□□ -1.2
VTI1Q04338 CCW12YLR110C 402 nt7.58□□□□□ -1.2
VTI1Q04338 PPS1YBR276C 2424 nt7.57□□□□□ -1.2
VTI1Q04338 HHY1YEL059W 309 nt7.57□□□□□ -1.2
VTI1Q04338 HRB1YNL004W 1365 nt7.57□□□□□ -1.2
VTI1Q04338 NUP84YDL116W 2181 nt7.56□□□□□ -1.2
VTI1Q04338 SUF3tG(CCC)D 72 nt7.56□□□□□ -1.2
VTI1Q04338 ADE1YAR015W 921 nt7.56□□□□□ -1.2
VTI1Q04338 SUN4YNL066W 1263 nt7.56□□□□□ -1.2
VTI1Q04338 GRH1YDR517W 1119 nt7.55□□□□□ -1.2
VTI1Q04338 NMA2YGR010W 1188 nt7.54□□□□□ -1.2
VTI1Q04338 ERG27YLR100W 1044 nt7.54□□□□□ -1.2
VTI1Q04338 PHO85YPL031C 918 nt7.54□□□□□ -1.2
VTI1Q04338 MRP1YDR347W 966 nt7.53□□□□□ -1.2
VTI1Q04338 TOS2YGR221C 1869 nt7.52□□□□□ -1.21
VTI1Q04338 HGH1YGR187C 1185 nt7.52□□□□□ -1.21
VTI1Q04338 SNT309YPR101W 528 nt7.52□□□□□ -1.21
VTI1Q04338 PET117YER058W 324 nt7.51□□□□□ -1.21
VTI1Q04338 PIL1YGR086C 1020 nt7.51□□□□□ -1.21
VTI1Q04338 YJL213WYJL213W 996 nt7.51□□□□□ -1.21
VTI1Q04338 GFA1YKL104C 2154 nt7.51□□□□□ -1.21
VTI1Q04338 HSM3YBR272C 1443 nt7.51□□□□□ -1.21
VTI1Q04338 TOS1YBR162C 1368 nt7.5□□□□□ -1.21
VTI1Q04338 MHP1YJL042W 4197 nt7.5□□□□□ -1.21
VTI1Q04338 MTR3YGR158C 753 nt7.5□□□□□ -1.21
VTI1Q04338 YIA6YIL006W 1122 nt7.5□□□□□ -1.21
VTI1Q04338 EHD3YDR036C 1503 nt7.5□□□□□ -1.21
VTI1Q04338 KIN1YDR122W 3195 nt7.49□□□□□ -1.21
VTI1Q04338 IRC5YFR038W 2562 nt7.49□□□□□ -1.21
VTI1Q04338 SEC23YPR181C 2307 nt7.49□□□□□ -1.21
VTI1Q04338 YGL081WYGL081W 963 nt7.49□□□□□ -1.21
VTI1Q04338 ARC35YNR035C 1029 nt7.49□□□□□ -1.21
VTI1Q04338 RPL43AYPR043W 279 nt7.49□□□□□ -1.21
VTI1Q04338 YPR127WYPR127W 1038 nt7.49□□□□□ -1.21
VTI1Q04338 AIM3YBR108W 2844 nt7.48□□□□□ -1.21
VTI1Q04338 YDR476CYDR476C 675 nt7.48□□□□□ -1.21
VTI1Q04338 FCP1YMR277W 2199 nt7.48□□□□□ -1.21
VTI1Q04338 SDH8YBR269C 417 nt7.48□□□□□ -1.21
VTI1Q04338 EFM1YHL039W 1758 nt7.48□□□□□ -1.21
VTI1Q04338 TDP1YBR223C 1635 nt7.48□□□□□ -1.21
VTI1Q04338 CEM1YER061C 1329 nt7.48□□□□□ -1.21
VTI1Q04338 AMN1YBR158W 1650 nt7.47□□□□□ -1.21
VTI1Q04338 CTA1YDR256C 1548 nt7.47□□□□□ -1.21
VTI1Q04338 MCH2YKL221W 1422 nt7.47□□□□□ -1.21
VTI1Q04338 DMC1YER179W 1005 nt7.47□□□□□ -1.21
VTI1Q04338 THR1YHR025W 1074 nt7.47□□□□□ -1.21
VTI1Q04338 MSI1YBR195C 1269 nt7.47□□□□□ -1.21
VTI1Q04338 HXT13YEL069C 1695 nt7.47□□□□□ -1.21
VTI1Q04338 CYB2YML054C 1776 nt7.46□□□□□ -1.21
VTI1Q04338 ERS1YCR075C 783 nt7.46□□□□□ -1.22
VTI1Q04338 DAL4YIR028W 1908 nt7.46□□□□□ -1.22
VTI1Q04338 tL(UAA)B1tL(UAA)B1 84 nt7.45□□□□□ -1.22
VTI1Q04338 tL(UAA)B2tL(UAA)B2 84 nt7.45□□□□□ -1.22
VTI1Q04338 tL(UAA)DtL(UAA)D 84 nt7.45□□□□□ -1.22
VTI1Q04338 SUP51tL(UAA)J 84 nt7.45□□□□□ -1.22
VTI1Q04338 tL(UAA)KtL(UAA)K 84 nt7.45□□□□□ -1.22
VTI1Q04338 tL(UAA)LtL(UAA)L 84 nt7.45□□□□□ -1.22
VTI1Q04338 tL(UAA)NtL(UAA)N 84 nt7.45□□□□□ -1.22
VTI1Q04338 DLD1YDL174C 1764 nt7.45□□□□□ -1.22
VTI1Q04338 NTG1YAL015C 1200 nt7.44□□□□□ -1.22
VTI1Q04338 MIX17YMR002W 471 nt7.44□□□□□ -1.22
VTI1Q04338 DPM1YPR183W 804 nt7.44□□□□□ -1.22
VTI1Q04338 CIT2YCR005C 1383 nt7.44□□□□□ -1.22
VTI1Q04338 RQC1YDR333C 2172 nt7.43□□□□□ -1.22
VTI1Q04338 HPT1YDR399W 666 nt7.43□□□□□ -1.22
VTI1Q04338 MRPL28YDR462W 444 nt7.43□□□□□ -1.22
VTI1Q04338 SOD2YHR008C 702 nt7.43□□□□□ -1.22
VTI1Q04338 PAM17YKR065C 594 nt7.43□□□□□ -1.22
VTI1Q04338 YOR389WYOR389W 1875 nt7.43□□□□□ -1.22
VTI1Q04338 YBR241CYBR241C 1467 nt7.42□□□□□ -1.22
VTI1Q04338 YCR049CYCR049C 447 nt7.41□□□□□ -1.22
VTI1Q04338 DOC1YGL240W 753 nt7.41□□□□□ -1.22
VTI1Q04338 YML122CYML122C 381 nt7.4□□□□□ -1.22
VTI1Q04338 MSG5YNL053W 1470 nt7.4□□□□□ -1.22
VTI1Q04338 GSH1YJL101C 2037 nt7.39□□□□□ -1.23
VTI1Q04338 FET4YMR319C 1659 nt7.39□□□□□ -1.23
VTI1Q04338 SGE1YPR198W 1632 nt7.39□□□□□ -1.23
VTI1Q04338 RPL2BYIL018W 765 nt7.39□□□□□ -1.23
VTI1Q04338 FUS3YBL016W 1062 nt7.38□□□□□ -1.23
VTI1Q04338 PAU21YOR394W 495 nt7.38□□□□□ -1.23
VTI1Q04338 PAU22YPL282C 495 nt7.38□□□□□ -1.23
VTI1Q04338 TAH11YJR046W 1815 nt7.38□□□□□ -1.23
VTI1Q04338 CCT3YJL014W 1605 nt7.38□□□□□ -1.23
VTI1Q04338 GPH1YPR160W 2709 nt7.37□□□□□ -1.23
VTI1Q04338 RIB1YBL033C 1038 nt7.37□□□□□ -1.23
VTI1Q04338 YOL099CYOL099C 492 nt7.37□□□□□ -1.23
VTI1Q04338 HBN1YCL026C-B 582 nt7.37□□□□□ -1.23
VTI1Q04338 TRR1YDR353W 960 nt7.36□□□□□ -1.23
VTI1Q04338 RTC4YNL254C 1206 nt7.36□□□□□ -1.23
VTI1Q04338 PET494YNR045W 1470 nt7.36□□□□□ -1.23
VTI1Q04338 TUF1YOR187W 1314 nt7.35□□□□□ -1.23
VTI1Q04338 ATP4YPL078C 735 nt7.35□□□□□ -1.23
VTI1Q04338 CDC13YDL220C 2775 nt7.35□□□□□ -1.23
VTI1Q04338 SSC1YJR045C 1965 nt7.35□□□□□ -1.23
VTI1Q04338 YLL066CYLL066C 3618 nt7.34□□□□□ -1.23
VTI1Q04338 RDN5-2RDN5-2 119 nt7.34□□□□□ -1.23
VTI1Q04338 RDN5-3RDN5-3 119 nt7.34□□□□□ -1.23
VTI1Q04338 RDN5-4RDN5-4 119 nt7.34□□□□□ -1.23
VTI1Q04338 RDN5-5RDN5-5 119 nt7.34□□□□□ -1.23
VTI1Q04338 YLR358CYLR358C 564 nt7.34□□□□□ -1.23
Retrieved 100 of 7,029 protein–RNA pairs in 50.4 ms