Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
NEK4P51957 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
NEK4P51957 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.69■■■□□ 2.34
NEK4P51957 AC091060.1-201ENST00000623524 1766 ntBASIC29.68■■■□□ 2.34
NEK4P51957 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC29.67■■■□□ 2.34
NEK4P51957 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC29.67■■■□□ 2.34
NEK4P51957 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
NEK4P51957 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.67■■■□□ 2.34
NEK4P51957 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.67■■■□□ 2.34
NEK4P51957 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.67■■■□□ 2.34
NEK4P51957 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC29.66■■■□□ 2.34
NEK4P51957 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
NEK4P51957 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
NEK4P51957 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.66■■■□□ 2.34
NEK4P51957 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
NEK4P51957 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
NEK4P51957 DUX4L29-201ENST00000425409 679 ntBASIC29.64■■■□□ 2.34
NEK4P51957 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC29.64■■■□□ 2.33
NEK4P51957 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
NEK4P51957 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
NEK4P51957 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.62■■■□□ 2.33
NEK4P51957 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
NEK4P51957 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
NEK4P51957 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC29.61■■■□□ 2.33
NEK4P51957 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
NEK4P51957 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
NEK4P51957 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
NEK4P51957 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
NEK4P51957 AP004609.3-201ENST00000610705 1884 ntBASIC29.59■■■□□ 2.33
NEK4P51957 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.59■■■□□ 2.33
NEK4P51957 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
NEK4P51957 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.58■■■□□ 2.33
NEK4P51957 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
NEK4P51957 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
NEK4P51957 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.57■■■□□ 2.32
NEK4P51957 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
NEK4P51957 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
NEK4P51957 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC29.55■■■□□ 2.32
NEK4P51957 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
NEK4P51957 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.55■■■□□ 2.32
NEK4P51957 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.55■■■□□ 2.32
NEK4P51957 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.55■■■□□ 2.32
NEK4P51957 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC29.55■■■□□ 2.32
NEK4P51957 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
NEK4P51957 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.53■■■□□ 2.32
NEK4P51957 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC29.53■■■□□ 2.32
NEK4P51957 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC29.53■■■□□ 2.32
NEK4P51957 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
NEK4P51957 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
NEK4P51957 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.52■■■□□ 2.32
NEK4P51957 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
NEK4P51957 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
NEK4P51957 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.52■■■□□ 2.32
NEK4P51957 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.52■■■□□ 2.32
NEK4P51957 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
NEK4P51957 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.51■■■□□ 2.31
NEK4P51957 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
NEK4P51957 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC29.51■■■□□ 2.31
NEK4P51957 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC29.51■■■□□ 2.31
NEK4P51957 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
NEK4P51957 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
NEK4P51957 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
NEK4P51957 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.49■■■□□ 2.31
NEK4P51957 AC145676.1-201ENST00000514988 2004 ntBASIC29.49■■■□□ 2.31
NEK4P51957 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.48■■■□□ 2.31
NEK4P51957 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
NEK4P51957 RPS2P35-201ENST00000443417 897 ntBASIC29.48■■■□□ 2.31
NEK4P51957 WHAMMP3-201ENST00000611636 1609 ntBASIC29.48■■■□□ 2.31
NEK4P51957 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
NEK4P51957 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
NEK4P51957 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
NEK4P51957 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.46■■■□□ 2.31
NEK4P51957 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
NEK4P51957 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
NEK4P51957 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
NEK4P51957 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC29.44■■■□□ 2.3
NEK4P51957 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.44■■■□□ 2.3
NEK4P51957 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
NEK4P51957 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
NEK4P51957 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
NEK4P51957 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
NEK4P51957 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.43■■■□□ 2.3
NEK4P51957 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
NEK4P51957 AC142472.1-201ENST00000612013 1741 ntBASIC29.42■■■□□ 2.3
NEK4P51957 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC29.42■■■□□ 2.3
NEK4P51957 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
NEK4P51957 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
NEK4P51957 AC092803.2-201ENST00000564287 1899 ntBASIC29.41■■■□□ 2.3
NEK4P51957 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC29.41■■■□□ 2.3
NEK4P51957 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
NEK4P51957 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
NEK4P51957 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
NEK4P51957 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.4■■■□□ 2.3
NEK4P51957 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
NEK4P51957 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
NEK4P51957 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
NEK4P51957 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC29.39■■■□□ 2.3
NEK4P51957 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.39■■■□□ 2.3
NEK4P51957 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
NEK4P51957 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC29.38■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms