Protein–RNA interactions for Protein: P27815

PDE4A, cAMP-specific 3',5'-cyclic phosphodiesterase 4A, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4AP27815 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
PDE4AP27815 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
PDE4AP27815 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
PDE4AP27815 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.29■■■□□ 2.6
PDE4AP27815 AC018358.1-201ENST00000631079 1402 ntBASIC31.29■■■□□ 2.6
PDE4AP27815 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDE4AP27815 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PDE4AP27815 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.28■■■□□ 2.6
PDE4AP27815 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PDE4AP27815 AC145676.1-201ENST00000514988 2004 ntBASIC31.27■■■□□ 2.6
PDE4AP27815 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
PDE4AP27815 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
PDE4AP27815 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC31.26■■■□□ 2.6
PDE4AP27815 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
PDE4AP27815 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
PDE4AP27815 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PDE4AP27815 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.26■■■□□ 2.59
PDE4AP27815 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PDE4AP27815 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.25■■■□□ 2.59
PDE4AP27815 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.24■■■□□ 2.59
PDE4AP27815 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PDE4AP27815 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PDE4AP27815 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PDE4AP27815 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PDE4AP27815 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC31.22■■■□□ 2.59
PDE4AP27815 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
PDE4AP27815 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PDE4AP27815 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PDE4AP27815 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PDE4AP27815 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PDE4AP27815 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.21■■■□□ 2.59
PDE4AP27815 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PDE4AP27815 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PDE4AP27815 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.2■■■□□ 2.59
PDE4AP27815 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC31.2■■■□□ 2.59
PDE4AP27815 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.58
PDE4AP27815 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.58
PDE4AP27815 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.19■■■□□ 2.58
PDE4AP27815 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.19■■■□□ 2.58
PDE4AP27815 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PDE4AP27815 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
PDE4AP27815 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC31.18■■■□□ 2.58
PDE4AP27815 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PDE4AP27815 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.17■■■□□ 2.58
PDE4AP27815 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PDE4AP27815 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
PDE4AP27815 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
PDE4AP27815 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.16■■■□□ 2.58
PDE4AP27815 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
PDE4AP27815 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
PDE4AP27815 AC044849.2-201ENST00000606596 710 ntBASIC31.15■■■□□ 2.58
PDE4AP27815 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PDE4AP27815 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC31.13■■■□□ 2.57
PDE4AP27815 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
PDE4AP27815 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
PDE4AP27815 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC31.13■■■□□ 2.57
PDE4AP27815 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PDE4AP27815 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
PDE4AP27815 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
PDE4AP27815 AC021231.2-201ENST00000594613 730 ntBASIC31.12■■■□□ 2.57
PDE4AP27815 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
PDE4AP27815 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PDE4AP27815 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
PDE4AP27815 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.12■■■□□ 2.57
PDE4AP27815 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
PDE4AP27815 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
PDE4AP27815 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC31.1■■■□□ 2.57
PDE4AP27815 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PDE4AP27815 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PDE4AP27815 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
PDE4AP27815 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PDE4AP27815 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
PDE4AP27815 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC31.08■■■□□ 2.57
PDE4AP27815 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.08■■■□□ 2.57
PDE4AP27815 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.08■■■□□ 2.57
PDE4AP27815 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
PDE4AP27815 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PDE4AP27815 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC31.08■■■□□ 2.57
PDE4AP27815 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.07■■■□□ 2.56
PDE4AP27815 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PDE4AP27815 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PDE4AP27815 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PDE4AP27815 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.07■■■□□ 2.56
PDE4AP27815 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PDE4AP27815 AC093323.1-202ENST00000635031 2045 ntBASIC31.07■■■□□ 2.56
PDE4AP27815 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PDE4AP27815 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PDE4AP27815 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.06■■■□□ 2.56
PDE4AP27815 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.05■■■□□ 2.56
PDE4AP27815 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PDE4AP27815 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC31.05■■■□□ 2.56
PDE4AP27815 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.05■■■□□ 2.56
PDE4AP27815 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
PDE4AP27815 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PDE4AP27815 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
PDE4AP27815 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
PDE4AP27815 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
PDE4AP27815 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.04■■■□□ 2.56
PDE4AP27815 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.04■■■□□ 2.56
PDE4AP27815 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms