Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MSR1P21757 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.99■■□□□ 1.11
MSR1P21757 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
MSR1P21757 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
MSR1P21757 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.98■■□□□ 1.11
MSR1P21757 AC008813.1-201ENST00000536597 885 ntBASIC21.98■■□□□ 1.11
MSR1P21757 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MSR1P21757 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.97■■□□□ 1.11
MSR1P21757 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.97■■□□□ 1.11
MSR1P21757 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MSR1P21757 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
MSR1P21757 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.97■■□□□ 1.11
MSR1P21757 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
MSR1P21757 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
MSR1P21757 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MSR1P21757 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MSR1P21757 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MSR1P21757 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MSR1P21757 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSR1P21757 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSR1P21757 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSR1P21757 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.95■■□□□ 1.1
MSR1P21757 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.95■■□□□ 1.1
MSR1P21757 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
MSR1P21757 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSR1P21757 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
MSR1P21757 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
MSR1P21757 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
MSR1P21757 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSR1P21757 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
MSR1P21757 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.93■■□□□ 1.1
MSR1P21757 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
MSR1P21757 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
MSR1P21757 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.93■■□□□ 1.1
MSR1P21757 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MSR1P21757 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
MSR1P21757 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
MSR1P21757 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.92■■□□□ 1.1
MSR1P21757 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
MSR1P21757 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
MSR1P21757 CR559946.2-201ENST00000623684 991 ntBASIC21.92■■□□□ 1.1
MSR1P21757 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MSR1P21757 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MSR1P21757 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MSR1P21757 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
MSR1P21757 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.91■■□□□ 1.1
MSR1P21757 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
MSR1P21757 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
MSR1P21757 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSR1P21757 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.9■■□□□ 1.1
MSR1P21757 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
MSR1P21757 AC148477.6-201ENST00000623746 465 ntBASIC21.89■■□□□ 1.09
MSR1P21757 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.89■■□□□ 1.09
MSR1P21757 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSR1P21757 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
MSR1P21757 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSR1P21757 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
MSR1P21757 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.88■■□□□ 1.09
MSR1P21757 WHAMMP3-201ENST00000611636 1609 ntBASIC21.88■■□□□ 1.09
MSR1P21757 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
MSR1P21757 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.88■■□□□ 1.09
MSR1P21757 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.88■■□□□ 1.09
MSR1P21757 AL449106.1-201ENST00000608517 1980 ntBASIC21.88■■□□□ 1.09
MSR1P21757 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSR1P21757 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.87■■□□□ 1.09
MSR1P21757 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSR1P21757 MIR3648-2-201ENST00000581792 180 ntBASIC21.87■■□□□ 1.09
MSR1P21757 MIR3648-1-201ENST00000615959 180 ntBASIC21.87■■□□□ 1.09
MSR1P21757 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSR1P21757 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
MSR1P21757 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.86■■□□□ 1.09
MSR1P21757 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MSR1P21757 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.86■■□□□ 1.09
MSR1P21757 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
MSR1P21757 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MSR1P21757 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
MSR1P21757 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MSR1P21757 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.86■■□□□ 1.09
MSR1P21757 MIR219A2-201ENST00000608502 1504 ntBASIC21.85■■□□□ 1.09
MSR1P21757 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MSR1P21757 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MSR1P21757 MIR7108-201ENST00000614319 87 ntBASIC21.85■■□□□ 1.09
MSR1P21757 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
MSR1P21757 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MSR1P21757 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
MSR1P21757 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MSR1P21757 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.85■■□□□ 1.09
MSR1P21757 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSR1P21757 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.84■■□□□ 1.09
MSR1P21757 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.84■■□□□ 1.09
MSR1P21757 HLA-V-202ENST00000446817 847 ntBASIC21.84■■□□□ 1.09
MSR1P21757 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.84■■□□□ 1.09
MSR1P21757 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSR1P21757 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSR1P21757 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MSR1P21757 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
MSR1P21757 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MSR1P21757 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MSR1P21757 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
MSR1P21757 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms