Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
COL11A2P13942 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
COL11A2P13942 AC009299.2-201ENST00000482477 511 ntBASIC31.32■■■□□ 2.6
COL11A2P13942 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
COL11A2P13942 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
COL11A2P13942 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.3■■■□□ 2.6
COL11A2P13942 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC31.3■■■□□ 2.6
COL11A2P13942 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
COL11A2P13942 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL11A2P13942 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL11A2P13942 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL11A2P13942 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL11A2P13942 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL11A2P13942 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL11A2P13942 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.28■■■□□ 2.6
COL11A2P13942 SMPD5-203ENST00000639008 1464 ntBASIC31.28■■■□□ 2.6
COL11A2P13942 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
COL11A2P13942 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.27■■■□□ 2.6
COL11A2P13942 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.27■■■□□ 2.6
COL11A2P13942 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
COL11A2P13942 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
COL11A2P13942 AC100797.4-201ENST00000631653 1827 ntBASIC31.26■■■□□ 2.6
COL11A2P13942 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
COL11A2P13942 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
COL11A2P13942 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.26■■■□□ 2.59
COL11A2P13942 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.26■■■□□ 2.59
COL11A2P13942 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
COL11A2P13942 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.25■■■□□ 2.59
COL11A2P13942 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.25■■■□□ 2.59
COL11A2P13942 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
COL11A2P13942 KRT8P33-201ENST00000508125 1423 ntBASIC31.24■■■□□ 2.59
COL11A2P13942 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
COL11A2P13942 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
COL11A2P13942 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.24■■■□□ 2.59
COL11A2P13942 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.23■■■□□ 2.59
COL11A2P13942 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
COL11A2P13942 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.22■■■□□ 2.59
COL11A2P13942 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.22■■■□□ 2.59
COL11A2P13942 AL592295.1-201ENST00000400984 884 ntBASIC31.22■■■□□ 2.59
COL11A2P13942 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.22■■■□□ 2.59
COL11A2P13942 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
COL11A2P13942 AC010980.1-201ENST00000587192 1142 ntBASIC31.22■■■□□ 2.59
COL11A2P13942 AC019069.1-201ENST00000610008 1333 ntBASIC31.22■■■□□ 2.59
COL11A2P13942 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
COL11A2P13942 AL359258.2-201ENST00000564063 1566 ntBASIC31.21■■■□□ 2.59
COL11A2P13942 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
COL11A2P13942 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.21■■■□□ 2.59
COL11A2P13942 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.2■■■□□ 2.59
COL11A2P13942 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
COL11A2P13942 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
COL11A2P13942 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
COL11A2P13942 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
COL11A2P13942 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC31.19■■■□□ 2.58
COL11A2P13942 RP9P-202ENST00000450133 1212 ntBASIC31.19■■■□□ 2.58
COL11A2P13942 PVT1_1.1-201ENST00000615125 194 ntBASIC31.19■■■□□ 2.58
COL11A2P13942 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
COL11A2P13942 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
COL11A2P13942 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.17■■■□□ 2.58
COL11A2P13942 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.17■■■□□ 2.58
COL11A2P13942 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.17■■■□□ 2.58
COL11A2P13942 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
COL11A2P13942 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
COL11A2P13942 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
COL11A2P13942 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
COL11A2P13942 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
COL11A2P13942 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
COL11A2P13942 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
COL11A2P13942 AP004833.2-201ENST00000532228 1454 ntBASIC31.15■■■□□ 2.58
COL11A2P13942 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
COL11A2P13942 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
COL11A2P13942 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.13■■■□□ 2.57
COL11A2P13942 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
COL11A2P13942 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
COL11A2P13942 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
COL11A2P13942 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.12■■■□□ 2.57
COL11A2P13942 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
COL11A2P13942 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
COL11A2P13942 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
COL11A2P13942 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
COL11A2P13942 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
COL11A2P13942 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.11■■■□□ 2.57
COL11A2P13942 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
COL11A2P13942 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
COL11A2P13942 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.1■■■□□ 2.57
COL11A2P13942 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
COL11A2P13942 MIR6765-201ENST00000614092 87 ntBASIC31.1■■■□□ 2.57
COL11A2P13942 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.09■■■□□ 2.57
COL11A2P13942 ST7-AS1-201ENST00000456775 1889 ntBASIC31.09■■■□□ 2.57
COL11A2P13942 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
COL11A2P13942 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
COL11A2P13942 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
COL11A2P13942 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
COL11A2P13942 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.09■■■□□ 2.57
COL11A2P13942 GUSBP5-201ENST00000418136 578 ntBASIC31.09■■■□□ 2.57
COL11A2P13942 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.09■■■□□ 2.57
COL11A2P13942 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
COL11A2P13942 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
COL11A2P13942 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
COL11A2P13942 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.08■■■□□ 2.57
COL11A2P13942 AC103834.1-201ENST00000520383 144 ntBASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms