Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PF4V1P10720 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
PF4V1P10720 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PF4V1P10720 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PF4V1P10720 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PF4V1P10720 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PF4V1P10720 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.69■□□□□ 0.74
PF4V1P10720 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PF4V1P10720 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PF4V1P10720 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PF4V1P10720 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PF4V1P10720 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PF4V1P10720 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PF4V1P10720 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.68■□□□□ 0.74
PF4V1P10720 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PF4V1P10720 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PF4V1P10720 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PF4V1P10720 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PF4V1P10720 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.66■□□□□ 0.74
PF4V1P10720 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PF4V1P10720 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PF4V1P10720 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PF4V1P10720 AC148477.6-201ENST00000623746 465 ntBASIC19.65■□□□□ 0.74
PF4V1P10720 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PF4V1P10720 MIR219A2-201ENST00000608502 1504 ntBASIC19.64■□□□□ 0.73
PF4V1P10720 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PF4V1P10720 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.63■□□□□ 0.73
PF4V1P10720 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PF4V1P10720 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PF4V1P10720 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PF4V1P10720 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PF4V1P10720 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PF4V1P10720 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PF4V1P10720 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.62■□□□□ 0.73
PF4V1P10720 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PF4V1P10720 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PF4V1P10720 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PF4V1P10720 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.62■□□□□ 0.73
PF4V1P10720 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.62■□□□□ 0.73
PF4V1P10720 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.61■□□□□ 0.73
PF4V1P10720 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PF4V1P10720 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PF4V1P10720 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PF4V1P10720 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PF4V1P10720 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PF4V1P10720 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PF4V1P10720 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.6■□□□□ 0.73
PF4V1P10720 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.6■□□□□ 0.73
PF4V1P10720 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PF4V1P10720 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PF4V1P10720 AC018358.1-201ENST00000631079 1402 ntBASIC19.59■□□□□ 0.73
PF4V1P10720 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.59■□□□□ 0.73
PF4V1P10720 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.59■□□□□ 0.73
PF4V1P10720 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
PF4V1P10720 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.59■□□□□ 0.73
PF4V1P10720 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
PF4V1P10720 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PF4V1P10720 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PF4V1P10720 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PF4V1P10720 AC142086.6-201ENST00000621154 1765 ntBASIC19.58■□□□□ 0.73
PF4V1P10720 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PF4V1P10720 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PF4V1P10720 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PF4V1P10720 AC126177.7-201ENST00000547904 679 ntBASIC19.58■□□□□ 0.72
PF4V1P10720 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PF4V1P10720 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PF4V1P10720 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PF4V1P10720 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PF4V1P10720 NTF6A-201ENST00000591175 560 ntBASIC19.57■□□□□ 0.72
PF4V1P10720 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PF4V1P10720 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PF4V1P10720 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PF4V1P10720 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.56■□□□□ 0.72
PF4V1P10720 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.56■□□□□ 0.72
PF4V1P10720 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PF4V1P10720 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PF4V1P10720 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PF4V1P10720 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PF4V1P10720 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PF4V1P10720 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PF4V1P10720 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PF4V1P10720 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.55■□□□□ 0.72
PF4V1P10720 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PF4V1P10720 AC060814.1-201ENST00000554326 538 ntBASIC19.55■□□□□ 0.72
PF4V1P10720 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PF4V1P10720 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PF4V1P10720 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PF4V1P10720 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.54■□□□□ 0.72
PF4V1P10720 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.54■□□□□ 0.72
PF4V1P10720 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PF4V1P10720 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PF4V1P10720 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.54■□□□□ 0.72
PF4V1P10720 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.54■□□□□ 0.72
PF4V1P10720 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PF4V1P10720 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PF4V1P10720 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PF4V1P10720 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PF4V1P10720 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PF4V1P10720 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.53■□□□□ 0.72
PF4V1P10720 AC012354.3-201ENST00000623734 483 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms