Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SNRPA1P09661 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
SNRPA1P09661 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SNRPA1P09661 REST-210ENST00000638187 1334 ntTSL 5 BASIC32.24■■■□□ 2.75
SNRPA1P09661 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SNRPA1P09661 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC32.22■■■□□ 2.75
SNRPA1P09661 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
SNRPA1P09661 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SNRPA1P09661 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SNRPA1P09661 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
SNRPA1P09661 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC32.21■■■□□ 2.75
SNRPA1P09661 SMPD5-203ENST00000639008 1464 ntBASIC32.21■■■□□ 2.75
SNRPA1P09661 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SNRPA1P09661 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC32.19■■■□□ 2.74
SNRPA1P09661 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SNRPA1P09661 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
SNRPA1P09661 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SNRPA1P09661 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC32.18■■■□□ 2.74
SNRPA1P09661 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SNRPA1P09661 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
SNRPA1P09661 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
SNRPA1P09661 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SNRPA1P09661 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC32.17■■■□□ 2.74
SNRPA1P09661 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SNRPA1P09661 AC004987.1-201ENST00000428627 508 ntBASIC32.17■■■□□ 2.74
SNRPA1P09661 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC32.17■■■□□ 2.74
SNRPA1P09661 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC32.17■■■□□ 2.74
SNRPA1P09661 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC32.16■■■□□ 2.74
SNRPA1P09661 TSPY13P-201ENST00000338964 914 ntBASIC32.16■■■□□ 2.74
SNRPA1P09661 ATP5G2P3-201ENST00000429083 425 ntBASIC32.16■■■□□ 2.74
SNRPA1P09661 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
SNRPA1P09661 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SNRPA1P09661 AC025884.2-201ENST00000553429 711 ntBASIC32.15■■■□□ 2.74
SNRPA1P09661 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
SNRPA1P09661 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
SNRPA1P09661 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC32.15■■■□□ 2.74
SNRPA1P09661 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SNRPA1P09661 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SNRPA1P09661 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SNRPA1P09661 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
SNRPA1P09661 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
SNRPA1P09661 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC32.14■■■□□ 2.74
SNRPA1P09661 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC32.14■■■□□ 2.74
SNRPA1P09661 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
SNRPA1P09661 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC32.13■■■□□ 2.73
SNRPA1P09661 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
SNRPA1P09661 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC32.13■■■□□ 2.73
SNRPA1P09661 AC009831.1-201ENST00000580420 1582 ntBASIC32.13■■■□□ 2.73
SNRPA1P09661 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SNRPA1P09661 GFER-205ENST00000569451 517 ntTSL 5 BASIC32.12■■■□□ 2.73
SNRPA1P09661 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
SNRPA1P09661 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SNRPA1P09661 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC32.1■■■□□ 2.73
SNRPA1P09661 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
SNRPA1P09661 AC133552.2-201ENST00000619106 1032 ntBASIC32.1■■■□□ 2.73
SNRPA1P09661 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
SNRPA1P09661 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC32.08■■■□□ 2.73
SNRPA1P09661 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SNRPA1P09661 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
SNRPA1P09661 AL592293.1-201ENST00000502889 1188 ntBASIC32.07■■■□□ 2.72
SNRPA1P09661 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC32.07■■■□□ 2.72
SNRPA1P09661 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SNRPA1P09661 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SNRPA1P09661 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC32.06■■■□□ 2.72
SNRPA1P09661 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
SNRPA1P09661 AC026202.3-201ENST00000600805 1127 ntBASIC32.06■■■□□ 2.72
SNRPA1P09661 AC129492.7-201ENST00000622992 756 ntBASIC32.06■■■□□ 2.72
SNRPA1P09661 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
SNRPA1P09661 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SNRPA1P09661 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
SNRPA1P09661 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC32.05■■■□□ 2.72
SNRPA1P09661 GUK1-208ENST00000366728 842 ntTSL 2 BASIC32.05■■■□□ 2.72
SNRPA1P09661 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
SNRPA1P09661 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC32.05■■■□□ 2.72
SNRPA1P09661 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.04■■■□□ 2.72
SNRPA1P09661 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC32.04■■■□□ 2.72
SNRPA1P09661 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
SNRPA1P09661 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC32.03■■■□□ 2.72
SNRPA1P09661 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
SNRPA1P09661 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
SNRPA1P09661 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
SNRPA1P09661 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
SNRPA1P09661 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
SNRPA1P09661 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
SNRPA1P09661 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
SNRPA1P09661 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
SNRPA1P09661 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
SNRPA1P09661 RP9P-202ENST00000450133 1212 ntBASIC32.02■■■□□ 2.72
SNRPA1P09661 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
SNRPA1P09661 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
SNRPA1P09661 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
SNRPA1P09661 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
SNRPA1P09661 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
SNRPA1P09661 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC32■■■□□ 2.71
SNRPA1P09661 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
SNRPA1P09661 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
SNRPA1P09661 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
SNRPA1P09661 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
SNRPA1P09661 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC32■■■□□ 2.71
SNRPA1P09661 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms