Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.47■■□□□ 1.19
HMGN1P05114 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HMGN1P05114 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HMGN1P05114 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.47■■□□□ 1.19
HMGN1P05114 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.47■■□□□ 1.19
HMGN1P05114 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HMGN1P05114 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HMGN1P05114 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HMGN1P05114 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HMGN1P05114 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HMGN1P05114 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.45■■□□□ 1.18
HMGN1P05114 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HMGN1P05114 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.45■■□□□ 1.18
HMGN1P05114 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.44■■□□□ 1.18
HMGN1P05114 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HMGN1P05114 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.44■■□□□ 1.18
HMGN1P05114 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.44■■□□□ 1.18
HMGN1P05114 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.44■■□□□ 1.18
HMGN1P05114 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.43■■□□□ 1.18
HMGN1P05114 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.43■■□□□ 1.18
HMGN1P05114 DUX4L28-201ENST00000623687 678 ntBASIC22.43■■□□□ 1.18
HMGN1P05114 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.43■■□□□ 1.18
HMGN1P05114 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HMGN1P05114 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HMGN1P05114 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.42■■□□□ 1.18
HMGN1P05114 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HMGN1P05114 AP004609.3-201ENST00000610705 1884 ntBASIC22.42■■□□□ 1.18
HMGN1P05114 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HMGN1P05114 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HMGN1P05114 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.41■■□□□ 1.18
HMGN1P05114 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.41■■□□□ 1.18
HMGN1P05114 MIR3665-201ENST00000578708 105 ntBASIC22.41■■□□□ 1.18
HMGN1P05114 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.41■■□□□ 1.18
HMGN1P05114 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HMGN1P05114 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HMGN1P05114 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HMGN1P05114 DUSP8P4-201ENST00000399538 1761 ntBASIC22.4■■□□□ 1.18
HMGN1P05114 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.4■■□□□ 1.18
HMGN1P05114 AC092803.2-201ENST00000564287 1899 ntBASIC22.4■■□□□ 1.18
HMGN1P05114 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.39■■□□□ 1.18
HMGN1P05114 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.39■■□□□ 1.18
HMGN1P05114 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HMGN1P05114 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HMGN1P05114 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.38■■□□□ 1.17
HMGN1P05114 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.38■■□□□ 1.17
HMGN1P05114 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HMGN1P05114 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
HMGN1P05114 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.37■■□□□ 1.17
HMGN1P05114 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.37■■□□□ 1.17
HMGN1P05114 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HMGN1P05114 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.36■■□□□ 1.17
HMGN1P05114 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
HMGN1P05114 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGN1P05114 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGN1P05114 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGN1P05114 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGN1P05114 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
HMGN1P05114 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGN1P05114 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGN1P05114 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.35■■□□□ 1.17
HMGN1P05114 AC020928.2-201ENST00000588717 2197 ntBASIC22.35■■□□□ 1.17
HMGN1P05114 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGN1P05114 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGN1P05114 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
HMGN1P05114 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGN1P05114 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HMGN1P05114 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HMGN1P05114 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
HMGN1P05114 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
HMGN1P05114 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.33■■□□□ 1.16
HMGN1P05114 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
HMGN1P05114 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.32■■□□□ 1.16
HMGN1P05114 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HMGN1P05114 AC110285.7-201ENST00000624417 1536 ntBASIC22.31■■□□□ 1.16
HMGN1P05114 AC142472.1-201ENST00000612013 1741 ntBASIC22.31■■□□□ 1.16
HMGN1P05114 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
HMGN1P05114 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HMGN1P05114 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HMGN1P05114 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.3■■□□□ 1.16
HMGN1P05114 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGN1P05114 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HMGN1P05114 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGN1P05114 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HMGN1P05114 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
HMGN1P05114 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HMGN1P05114 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HMGN1P05114 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
HMGN1P05114 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
HMGN1P05114 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HMGN1P05114 AP006261.1-201ENST00000584783 668 ntBASIC22.29■■□□□ 1.16
HMGN1P05114 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.29■■□□□ 1.16
HMGN1P05114 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.29■■□□□ 1.16
HMGN1P05114 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
HMGN1P05114 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
HMGN1P05114 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
HMGN1P05114 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.27■■□□□ 1.16
HMGN1P05114 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HMGN1P05114 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HMGN1P05114 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.27■■□□□ 1.16
HMGN1P05114 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms