Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
APOC1P02654 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.82■■□□□ 1.08
APOC1P02654 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.82■■□□□ 1.08
APOC1P02654 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
APOC1P02654 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.81■■□□□ 1.08
APOC1P02654 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
APOC1P02654 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APOC1P02654 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.81■■□□□ 1.08
APOC1P02654 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.81■■□□□ 1.08
APOC1P02654 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.81■■□□□ 1.08
APOC1P02654 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.81■■□□□ 1.08
APOC1P02654 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
APOC1P02654 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
APOC1P02654 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
APOC1P02654 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APOC1P02654 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APOC1P02654 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
APOC1P02654 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
APOC1P02654 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
APOC1P02654 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.79■■□□□ 1.08
APOC1P02654 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
APOC1P02654 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
APOC1P02654 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APOC1P02654 LINC01971-201ENST00000617888 1048 ntBASIC21.78■■□□□ 1.08
APOC1P02654 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.78■■□□□ 1.08
APOC1P02654 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
APOC1P02654 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
APOC1P02654 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
APOC1P02654 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APOC1P02654 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
APOC1P02654 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
APOC1P02654 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.75■■□□□ 1.07
APOC1P02654 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.75■■□□□ 1.07
APOC1P02654 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.75■■□□□ 1.07
APOC1P02654 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
APOC1P02654 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.75■■□□□ 1.07
APOC1P02654 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
APOC1P02654 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APOC1P02654 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
APOC1P02654 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.75■■□□□ 1.07
APOC1P02654 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
APOC1P02654 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
APOC1P02654 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.74■■□□□ 1.07
APOC1P02654 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
APOC1P02654 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
APOC1P02654 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.74■■□□□ 1.07
APOC1P02654 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
APOC1P02654 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.73■■□□□ 1.07
APOC1P02654 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.73■■□□□ 1.07
APOC1P02654 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.73■■□□□ 1.07
APOC1P02654 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
APOC1P02654 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
APOC1P02654 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
APOC1P02654 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APOC1P02654 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
APOC1P02654 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.72■■□□□ 1.07
APOC1P02654 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
APOC1P02654 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APOC1P02654 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
APOC1P02654 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
APOC1P02654 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
APOC1P02654 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
APOC1P02654 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.71■■□□□ 1.07
APOC1P02654 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
APOC1P02654 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
APOC1P02654 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
APOC1P02654 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
APOC1P02654 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
APOC1P02654 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APOC1P02654 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.7■■□□□ 1.06
APOC1P02654 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.7■■□□□ 1.06
APOC1P02654 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
APOC1P02654 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
APOC1P02654 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.69■■□□□ 1.06
APOC1P02654 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.69■■□□□ 1.06
APOC1P02654 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.69■■□□□ 1.06
APOC1P02654 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
APOC1P02654 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
APOC1P02654 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
APOC1P02654 DUX4L13-201ENST00000554103 1267 ntBASIC21.68■■□□□ 1.06
APOC1P02654 DUX4L15-201ENST00000611059 1267 ntBASIC21.68■■□□□ 1.06
APOC1P02654 DUX4L23-201ENST00000615195 1269 ntBASIC21.68■■□□□ 1.06
APOC1P02654 DUX4L24-201ENST00000617576 1269 ntBASIC21.68■■□□□ 1.06
APOC1P02654 DUX4L22-201ENST00000618238 1269 ntBASIC21.68■■□□□ 1.06
APOC1P02654 DUX4L20-201ENST00000619712 1269 ntBASIC21.68■■□□□ 1.06
APOC1P02654 DUX4L21-201ENST00000622058 1269 ntBASIC21.68■■□□□ 1.06
APOC1P02654 DUX4L10-201ENST00000622460 1267 ntBASIC21.68■■□□□ 1.06
APOC1P02654 DUX4L25-201ENST00000624915 1269 ntBASIC21.68■■□□□ 1.06
APOC1P02654 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
APOC1P02654 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
APOC1P02654 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
APOC1P02654 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
APOC1P02654 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
APOC1P02654 AC008813.1-201ENST00000536597 885 ntBASIC21.67■■□□□ 1.06
APOC1P02654 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
APOC1P02654 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
APOC1P02654 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
APOC1P02654 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.66■■□□□ 1.06
APOC1P02654 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
APOC1P02654 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms