Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.15■■□□□ 1.62
USP1O94782 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
USP1O94782 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
USP1O94782 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
USP1O94782 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.15■■□□□ 1.62
USP1O94782 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
USP1O94782 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
USP1O94782 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.14■■□□□ 1.61
USP1O94782 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
USP1O94782 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.13■■□□□ 1.61
USP1O94782 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
USP1O94782 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
USP1O94782 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.12■■□□□ 1.61
USP1O94782 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.12■■□□□ 1.61
USP1O94782 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
USP1O94782 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
USP1O94782 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
USP1O94782 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.11■■□□□ 1.61
USP1O94782 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
USP1O94782 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
USP1O94782 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
USP1O94782 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
USP1O94782 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
USP1O94782 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.1■■□□□ 1.61
USP1O94782 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.1■■□□□ 1.61
USP1O94782 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
USP1O94782 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
USP1O94782 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
USP1O94782 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
USP1O94782 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.09■■□□□ 1.61
USP1O94782 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
USP1O94782 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.08■■□□□ 1.61
USP1O94782 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
USP1O94782 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.08■■□□□ 1.61
USP1O94782 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
USP1O94782 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
USP1O94782 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.07■■□□□ 1.6
USP1O94782 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
USP1O94782 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.07■■□□□ 1.6
USP1O94782 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
USP1O94782 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.06■■□□□ 1.6
USP1O94782 AL449106.1-201ENST00000608517 1980 ntBASIC25.05■■□□□ 1.6
USP1O94782 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
USP1O94782 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
USP1O94782 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.05■■□□□ 1.6
USP1O94782 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.05■■□□□ 1.6
USP1O94782 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
USP1O94782 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.04■■□□□ 1.6
USP1O94782 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.04■■□□□ 1.6
USP1O94782 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.04■■□□□ 1.6
USP1O94782 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.04■■□□□ 1.6
USP1O94782 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
USP1O94782 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
USP1O94782 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.03■■□□□ 1.6
USP1O94782 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.03■■□□□ 1.6
USP1O94782 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
USP1O94782 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.02■■□□□ 1.6
USP1O94782 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.02■■□□□ 1.6
USP1O94782 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
USP1O94782 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
USP1O94782 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.02■■□□□ 1.6
USP1O94782 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
USP1O94782 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
USP1O94782 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
USP1O94782 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
USP1O94782 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
USP1O94782 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.01■■□□□ 1.59
USP1O94782 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.01■■□□□ 1.59
USP1O94782 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
USP1O94782 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.01■■□□□ 1.59
USP1O94782 LINC01971-201ENST00000617888 1048 ntBASIC25■■□□□ 1.59
USP1O94782 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25■■□□□ 1.59
USP1O94782 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
USP1O94782 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
USP1O94782 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
USP1O94782 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.99■■□□□ 1.59
USP1O94782 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
USP1O94782 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.98■■□□□ 1.59
USP1O94782 AP004609.3-201ENST00000610705 1884 ntBASIC24.98■■□□□ 1.59
USP1O94782 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
USP1O94782 ABHD17AP4-201ENST00000411545 909 ntBASIC24.97■■□□□ 1.59
USP1O94782 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
USP1O94782 WHAMMP3-201ENST00000611636 1609 ntBASIC24.97■■□□□ 1.59
USP1O94782 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
USP1O94782 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.97■■□□□ 1.59
USP1O94782 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
USP1O94782 AC091060.1-201ENST00000623524 1766 ntBASIC24.96■■□□□ 1.59
USP1O94782 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
USP1O94782 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
USP1O94782 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.95■■□□□ 1.58
USP1O94782 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
USP1O94782 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
USP1O94782 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
USP1O94782 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
USP1O94782 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.92■■□□□ 1.58
USP1O94782 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.91■■□□□ 1.58
USP1O94782 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.91■■□□□ 1.58
USP1O94782 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
USP1O94782 DUX4L13-201ENST00000554103 1267 ntBASIC24.91■■□□□ 1.58
USP1O94782 DUX4L15-201ENST00000611059 1267 ntBASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms