Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFPL1O75677 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.04■■□□□ 1.6
RFPL1O75677 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.04■■□□□ 1.6
RFPL1O75677 LINC00273-201ENST00000539813 1452 ntBASIC25.03■■□□□ 1.6
RFPL1O75677 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RFPL1O75677 AC108673.1-201ENST00000510422 1159 ntBASIC25.03■■□□□ 1.6
RFPL1O75677 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
RFPL1O75677 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.02■■□□□ 1.6
RFPL1O75677 AC021231.2-201ENST00000594613 730 ntBASIC25.02■■□□□ 1.6
RFPL1O75677 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.02■■□□□ 1.6
RFPL1O75677 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.02■■□□□ 1.6
RFPL1O75677 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
RFPL1O75677 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RFPL1O75677 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.6
RFPL1O75677 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RFPL1O75677 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RFPL1O75677 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RFPL1O75677 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.01■■□□□ 1.59
RFPL1O75677 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25■■□□□ 1.59
RFPL1O75677 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RFPL1O75677 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RFPL1O75677 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RFPL1O75677 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RFPL1O75677 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RFPL1O75677 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.99■■□□□ 1.59
RFPL1O75677 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFPL1O75677 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFPL1O75677 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFPL1O75677 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.98■■□□□ 1.59
RFPL1O75677 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.98■■□□□ 1.59
RFPL1O75677 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RFPL1O75677 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.97■■□□□ 1.59
RFPL1O75677 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
RFPL1O75677 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RFPL1O75677 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.97■■□□□ 1.59
RFPL1O75677 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.96■■□□□ 1.59
RFPL1O75677 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
RFPL1O75677 MIR4449-201ENST00000578365 66 ntBASIC24.96■■□□□ 1.59
RFPL1O75677 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
RFPL1O75677 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RFPL1O75677 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.95■■□□□ 1.58
RFPL1O75677 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RFPL1O75677 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.95■■□□□ 1.58
RFPL1O75677 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
RFPL1O75677 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFPL1O75677 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFPL1O75677 MIR639-201ENST00000384974 98 ntBASIC24.94■■□□□ 1.58
RFPL1O75677 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RFPL1O75677 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RFPL1O75677 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.93■■□□□ 1.58
RFPL1O75677 AC145676.1-201ENST00000514988 2004 ntBASIC24.93■■□□□ 1.58
RFPL1O75677 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.93■■□□□ 1.58
RFPL1O75677 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RFPL1O75677 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RFPL1O75677 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.92■■□□□ 1.58
RFPL1O75677 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.92■■□□□ 1.58
RFPL1O75677 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
RFPL1O75677 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.92■■□□□ 1.58
RFPL1O75677 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
RFPL1O75677 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RFPL1O75677 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RFPL1O75677 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RFPL1O75677 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.89■■□□□ 1.58
RFPL1O75677 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.89■■□□□ 1.58
RFPL1O75677 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
RFPL1O75677 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.89■■□□□ 1.58
RFPL1O75677 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.89■■□□□ 1.58
RFPL1O75677 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RFPL1O75677 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.89■■□□□ 1.57
RFPL1O75677 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RFPL1O75677 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RFPL1O75677 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
RFPL1O75677 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RFPL1O75677 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
RFPL1O75677 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.86■■□□□ 1.57
RFPL1O75677 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.85■■□□□ 1.57
RFPL1O75677 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RFPL1O75677 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.85■■□□□ 1.57
RFPL1O75677 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RFPL1O75677 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RFPL1O75677 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.83■■□□□ 1.57
RFPL1O75677 MIR3648-2-201ENST00000581792 180 ntBASIC24.83■■□□□ 1.57
RFPL1O75677 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.83■■□□□ 1.57
RFPL1O75677 MIR3648-1-201ENST00000615959 180 ntBASIC24.83■■□□□ 1.57
RFPL1O75677 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
RFPL1O75677 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.83■■□□□ 1.57
RFPL1O75677 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
RFPL1O75677 AC020928.2-201ENST00000588717 2197 ntBASIC24.83■■□□□ 1.56
RFPL1O75677 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.82■■□□□ 1.56
RFPL1O75677 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
RFPL1O75677 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.82■■□□□ 1.56
RFPL1O75677 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.82■■□□□ 1.56
RFPL1O75677 AC016575.1-201ENST00000607026 382 ntBASIC24.82■■□□□ 1.56
RFPL1O75677 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.82■■□□□ 1.56
RFPL1O75677 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RFPL1O75677 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RFPL1O75677 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.81■■□□□ 1.56
RFPL1O75677 AP004609.3-201ENST00000610705 1884 ntBASIC24.81■■□□□ 1.56
RFPL1O75677 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RFPL1O75677 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms