Protein–RNA interactions for Protein: O75317

USP12, Ubiquitin carboxyl-terminal hydrolase 12, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP12O75317 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
USP12O75317 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
USP12O75317 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.44■■□□□ 1.66
USP12O75317 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
USP12O75317 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
USP12O75317 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
USP12O75317 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
USP12O75317 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.44■■□□□ 1.66
USP12O75317 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
USP12O75317 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
USP12O75317 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
USP12O75317 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
USP12O75317 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.43■■□□□ 1.66
USP12O75317 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
USP12O75317 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
USP12O75317 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
USP12O75317 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.42■■□□□ 1.66
USP12O75317 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
USP12O75317 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.42■■□□□ 1.66
USP12O75317 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.42■■□□□ 1.66
USP12O75317 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.42■■□□□ 1.66
USP12O75317 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
USP12O75317 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
USP12O75317 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
USP12O75317 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
USP12O75317 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
USP12O75317 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
USP12O75317 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.4■■□□□ 1.66
USP12O75317 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.4■■□□□ 1.66
USP12O75317 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.4■■□□□ 1.66
USP12O75317 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
USP12O75317 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
USP12O75317 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
USP12O75317 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.39■■□□□ 1.66
USP12O75317 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
USP12O75317 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
USP12O75317 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
USP12O75317 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.38■■□□□ 1.65
USP12O75317 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.38■■□□□ 1.65
USP12O75317 DUX4L13-201ENST00000554103 1267 ntBASIC25.38■■□□□ 1.65
USP12O75317 DUX4L15-201ENST00000611059 1267 ntBASIC25.38■■□□□ 1.65
USP12O75317 DUX4L23-201ENST00000615195 1269 ntBASIC25.38■■□□□ 1.65
USP12O75317 DUX4L24-201ENST00000617576 1269 ntBASIC25.38■■□□□ 1.65
USP12O75317 DUX4L22-201ENST00000618238 1269 ntBASIC25.38■■□□□ 1.65
USP12O75317 DUX4L20-201ENST00000619712 1269 ntBASIC25.38■■□□□ 1.65
USP12O75317 DUX4L21-201ENST00000622058 1269 ntBASIC25.38■■□□□ 1.65
USP12O75317 DUX4L10-201ENST00000622460 1267 ntBASIC25.38■■□□□ 1.65
USP12O75317 DUX4L25-201ENST00000624915 1269 ntBASIC25.38■■□□□ 1.65
USP12O75317 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.38■■□□□ 1.65
USP12O75317 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
USP12O75317 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
USP12O75317 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.37■■□□□ 1.65
USP12O75317 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.37■■□□□ 1.65
USP12O75317 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
USP12O75317 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
USP12O75317 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
USP12O75317 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
USP12O75317 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.35■■□□□ 1.65
USP12O75317 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
USP12O75317 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
USP12O75317 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.34■■□□□ 1.65
USP12O75317 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
USP12O75317 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.34■■□□□ 1.65
USP12O75317 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.34■■□□□ 1.65
USP12O75317 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
USP12O75317 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.34■■□□□ 1.65
USP12O75317 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
USP12O75317 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
USP12O75317 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
USP12O75317 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.33■■□□□ 1.65
USP12O75317 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
USP12O75317 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.32■■□□□ 1.64
USP12O75317 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.32■■□□□ 1.64
USP12O75317 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
USP12O75317 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
USP12O75317 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
USP12O75317 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
USP12O75317 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
USP12O75317 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
USP12O75317 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
USP12O75317 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
USP12O75317 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.29■■□□□ 1.64
USP12O75317 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USP12O75317 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
USP12O75317 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
USP12O75317 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
USP12O75317 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
USP12O75317 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.28■■□□□ 1.64
USP12O75317 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.27■■□□□ 1.64
USP12O75317 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
USP12O75317 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.27■■□□□ 1.64
USP12O75317 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
USP12O75317 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
USP12O75317 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
USP12O75317 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.26■■□□□ 1.63
USP12O75317 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
USP12O75317 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.26■■□□□ 1.63
USP12O75317 AL449106.1-201ENST00000608517 1980 ntBASIC25.25■■□□□ 1.63
USP12O75317 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
USP12O75317 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms