Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHGA12O60330 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGA12O60330 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGA12O60330 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHGA12O60330 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHGA12O60330 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.73■■□□□ 1.55
PCDHGA12O60330 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.72■■□□□ 1.55
PCDHGA12O60330 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHGA12O60330 RARRES2P1-201ENST00000474487 481 ntBASIC24.72■■□□□ 1.55
PCDHGA12O60330 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGA12O60330 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDHGA12O60330 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGA12O60330 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGA12O60330 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHGA12O60330 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDHGA12O60330 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDHGA12O60330 AC007029.1-201ENST00000604183 313 ntBASIC24.71■■□□□ 1.55
PCDHGA12O60330 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
PCDHGA12O60330 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHGA12O60330 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.7■■□□□ 1.54
PCDHGA12O60330 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.7■■□□□ 1.54
PCDHGA12O60330 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHGA12O60330 ST7-AS1-201ENST00000456775 1889 ntBASIC24.7■■□□□ 1.54
PCDHGA12O60330 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
PCDHGA12O60330 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHGA12O60330 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGA12O60330 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHGA12O60330 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGA12O60330 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGA12O60330 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGA12O60330 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
PCDHGA12O60330 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHGA12O60330 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGA12O60330 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGA12O60330 AC129492.7-201ENST00000622992 756 ntBASIC24.67■■□□□ 1.54
PCDHGA12O60330 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGA12O60330 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHGA12O60330 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHGA12O60330 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.66■■□□□ 1.54
PCDHGA12O60330 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGA12O60330 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHGA12O60330 AP004833.2-201ENST00000532228 1454 ntBASIC24.65■■□□□ 1.54
PCDHGA12O60330 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGA12O60330 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
PCDHGA12O60330 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGA12O60330 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHGA12O60330 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.65■■□□□ 1.54
PCDHGA12O60330 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.64■■□□□ 1.54
PCDHGA12O60330 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
PCDHGA12O60330 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHGA12O60330 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.64■■□□□ 1.54
PCDHGA12O60330 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.64■■□□□ 1.54
PCDHGA12O60330 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHGA12O60330 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGA12O60330 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGA12O60330 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHGA12O60330 AC133552.2-201ENST00000619106 1032 ntBASIC24.63■■□□□ 1.53
PCDHGA12O60330 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHGA12O60330 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGA12O60330 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGA12O60330 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGA12O60330 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGA12O60330 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHGA12O60330 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGA12O60330 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHGA12O60330 AC009831.1-201ENST00000580420 1582 ntBASIC24.62■■□□□ 1.53
PCDHGA12O60330 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGA12O60330 AL592293.1-201ENST00000502889 1188 ntBASIC24.61■■□□□ 1.53
PCDHGA12O60330 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHGA12O60330 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDHGA12O60330 SMPD5-203ENST00000639008 1464 ntBASIC24.59■■□□□ 1.53
PCDHGA12O60330 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDHGA12O60330 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.59■■□□□ 1.53
PCDHGA12O60330 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
PCDHGA12O60330 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGA12O60330 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGA12O60330 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGA12O60330 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGA12O60330 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGA12O60330 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.52
PCDHGA12O60330 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGA12O60330 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
PCDHGA12O60330 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.57■■□□□ 1.52
PCDHGA12O60330 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.57■■□□□ 1.52
PCDHGA12O60330 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGA12O60330 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGA12O60330 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGA12O60330 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGA12O60330 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGA12O60330 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.56■■□□□ 1.52
PCDHGA12O60330 DUX4L18-201ENST00000553347 1267 ntBASIC24.56■■□□□ 1.52
PCDHGA12O60330 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGA12O60330 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGA12O60330 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.55■■□□□ 1.52
PCDHGA12O60330 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
PCDHGA12O60330 AL359258.2-201ENST00000564063 1566 ntBASIC24.54■■□□□ 1.52
PCDHGA12O60330 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGA12O60330 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGA12O60330 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
PCDHGA12O60330 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms