Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 DUX4L29-201ENST00000425409 679 ntBASIC20.9■□□□□ 0.94
KCNAB3O43448 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.9■□□□□ 0.94
KCNAB3O43448 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNAB3O43448 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNAB3O43448 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
KCNAB3O43448 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNAB3O43448 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.89■□□□□ 0.93
KCNAB3O43448 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.89■□□□□ 0.93
KCNAB3O43448 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNAB3O43448 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNAB3O43448 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.88■□□□□ 0.93
KCNAB3O43448 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNAB3O43448 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNAB3O43448 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.87■□□□□ 0.93
KCNAB3O43448 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNAB3O43448 AC108673.1-201ENST00000510422 1159 ntBASIC20.87■□□□□ 0.93
KCNAB3O43448 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.87■□□□□ 0.93
KCNAB3O43448 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
KCNAB3O43448 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNAB3O43448 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
KCNAB3O43448 AC010864.1-201ENST00000609407 1511 ntBASIC20.86■□□□□ 0.93
KCNAB3O43448 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNAB3O43448 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNAB3O43448 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNAB3O43448 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNAB3O43448 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.85■□□□□ 0.93
KCNAB3O43448 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
KCNAB3O43448 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KCNAB3O43448 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNAB3O43448 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KCNAB3O43448 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.85■□□□□ 0.93
KCNAB3O43448 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.84■□□□□ 0.93
KCNAB3O43448 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNAB3O43448 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.84■□□□□ 0.93
KCNAB3O43448 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.83■□□□□ 0.93
KCNAB3O43448 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNAB3O43448 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNAB3O43448 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KCNAB3O43448 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KCNAB3O43448 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.83■□□□□ 0.92
KCNAB3O43448 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KCNAB3O43448 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNAB3O43448 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNAB3O43448 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.82■□□□□ 0.92
KCNAB3O43448 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNAB3O43448 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.81■□□□□ 0.92
KCNAB3O43448 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNAB3O43448 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNAB3O43448 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KCNAB3O43448 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.81■□□□□ 0.92
KCNAB3O43448 AC093323.1-202ENST00000635031 2045 ntBASIC20.81■□□□□ 0.92
KCNAB3O43448 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNAB3O43448 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.81■□□□□ 0.92
KCNAB3O43448 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.8■□□□□ 0.92
KCNAB3O43448 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.8■□□□□ 0.92
KCNAB3O43448 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.8■□□□□ 0.92
KCNAB3O43448 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
KCNAB3O43448 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KCNAB3O43448 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
KCNAB3O43448 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
KCNAB3O43448 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
KCNAB3O43448 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNAB3O43448 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNAB3O43448 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNAB3O43448 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KCNAB3O43448 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KCNAB3O43448 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNAB3O43448 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
KCNAB3O43448 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.79■□□□□ 0.92
KCNAB3O43448 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.78■□□□□ 0.92
KCNAB3O43448 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.78■□□□□ 0.92
KCNAB3O43448 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KCNAB3O43448 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
KCNAB3O43448 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
KCNAB3O43448 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.77■□□□□ 0.92
KCNAB3O43448 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNAB3O43448 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNAB3O43448 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNAB3O43448 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.77■□□□□ 0.92
KCNAB3O43448 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNAB3O43448 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
KCNAB3O43448 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNAB3O43448 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
KCNAB3O43448 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNAB3O43448 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNAB3O43448 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.76■□□□□ 0.91
KCNAB3O43448 AC021231.2-201ENST00000594613 730 ntBASIC20.76■□□□□ 0.91
KCNAB3O43448 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNAB3O43448 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNAB3O43448 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.76■□□□□ 0.91
KCNAB3O43448 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
KCNAB3O43448 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNAB3O43448 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNAB3O43448 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.75■□□□□ 0.91
KCNAB3O43448 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
KCNAB3O43448 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNAB3O43448 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNAB3O43448 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNAB3O43448 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.74■□□□□ 0.91
KCNAB3O43448 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms