Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.93■■□□□ 1.42
NDUFS4O43181 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NDUFS4O43181 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NDUFS4O43181 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
NDUFS4O43181 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.92■■□□□ 1.42
NDUFS4O43181 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.92■■□□□ 1.42
NDUFS4O43181 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.91■■□□□ 1.42
NDUFS4O43181 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NDUFS4O43181 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NDUFS4O43181 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
NDUFS4O43181 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NDUFS4O43181 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NDUFS4O43181 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
NDUFS4O43181 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
NDUFS4O43181 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
NDUFS4O43181 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
NDUFS4O43181 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
NDUFS4O43181 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
NDUFS4O43181 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
NDUFS4O43181 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NDUFS4O43181 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
NDUFS4O43181 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NDUFS4O43181 MIR4449-201ENST00000578365 66 ntBASIC23.88■■□□□ 1.41
NDUFS4O43181 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
NDUFS4O43181 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
NDUFS4O43181 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NDUFS4O43181 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NDUFS4O43181 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NDUFS4O43181 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.86■■□□□ 1.41
NDUFS4O43181 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NDUFS4O43181 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.86■■□□□ 1.41
NDUFS4O43181 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
NDUFS4O43181 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NDUFS4O43181 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
NDUFS4O43181 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NDUFS4O43181 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NDUFS4O43181 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NDUFS4O43181 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NDUFS4O43181 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NDUFS4O43181 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NDUFS4O43181 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NDUFS4O43181 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NDUFS4O43181 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NDUFS4O43181 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.85■■□□□ 1.41
NDUFS4O43181 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.85■■□□□ 1.41
NDUFS4O43181 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
NDUFS4O43181 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
NDUFS4O43181 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NDUFS4O43181 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NDUFS4O43181 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.84■■□□□ 1.41
NDUFS4O43181 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NDUFS4O43181 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.84■■□□□ 1.41
NDUFS4O43181 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NDUFS4O43181 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NDUFS4O43181 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NDUFS4O43181 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
NDUFS4O43181 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NDUFS4O43181 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NDUFS4O43181 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
NDUFS4O43181 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
NDUFS4O43181 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NDUFS4O43181 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
NDUFS4O43181 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.83■■□□□ 1.41
NDUFS4O43181 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
NDUFS4O43181 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NDUFS4O43181 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NDUFS4O43181 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.82■■□□□ 1.4
NDUFS4O43181 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.82■■□□□ 1.4
NDUFS4O43181 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NDUFS4O43181 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
NDUFS4O43181 AL121749.1-202ENST00000609313 2153 ntBASIC23.82■■□□□ 1.4
NDUFS4O43181 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.82■■□□□ 1.4
NDUFS4O43181 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NDUFS4O43181 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NDUFS4O43181 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.8■■□□□ 1.4
NDUFS4O43181 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
NDUFS4O43181 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NDUFS4O43181 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.79■■□□□ 1.4
NDUFS4O43181 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NDUFS4O43181 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NDUFS4O43181 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NDUFS4O43181 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NDUFS4O43181 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.79■■□□□ 1.4
NDUFS4O43181 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NDUFS4O43181 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NDUFS4O43181 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
NDUFS4O43181 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.78■■□□□ 1.4
NDUFS4O43181 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.78■■□□□ 1.4
NDUFS4O43181 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
NDUFS4O43181 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NDUFS4O43181 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NDUFS4O43181 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NDUFS4O43181 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
NDUFS4O43181 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.77■■□□□ 1.4
NDUFS4O43181 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NDUFS4O43181 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
NDUFS4O43181 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
NDUFS4O43181 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
NDUFS4O43181 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NDUFS4O43181 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms