Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.05■□□□□ 0.96
SHOXO15266 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHOXO15266 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHOXO15266 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SHOXO15266 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
SHOXO15266 AC091060.1-201ENST00000623524 1766 ntBASIC21.04■□□□□ 0.96
SHOXO15266 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.04■□□□□ 0.96
SHOXO15266 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SHOXO15266 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHOXO15266 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHOXO15266 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SHOXO15266 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SHOXO15266 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SHOXO15266 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SHOXO15266 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHOXO15266 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.02■□□□□ 0.96
SHOXO15266 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SHOXO15266 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SHOXO15266 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SHOXO15266 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHOXO15266 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHOXO15266 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHOXO15266 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHOXO15266 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SHOXO15266 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHOXO15266 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHOXO15266 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHOXO15266 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHOXO15266 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SHOXO15266 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHOXO15266 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SHOXO15266 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.99■□□□□ 0.95
SHOXO15266 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.99■□□□□ 0.95
SHOXO15266 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHOXO15266 MIR762-201ENST00000390236 83 ntBASIC20.98■□□□□ 0.95
SHOXO15266 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.98■□□□□ 0.95
SHOXO15266 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.98■□□□□ 0.95
SHOXO15266 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.98■□□□□ 0.95
SHOXO15266 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHOXO15266 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHOXO15266 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.97■□□□□ 0.95
SHOXO15266 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHOXO15266 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHOXO15266 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHOXO15266 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHOXO15266 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHOXO15266 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHOXO15266 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHOXO15266 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.96■□□□□ 0.95
SHOXO15266 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHOXO15266 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHOXO15266 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHOXO15266 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SHOXO15266 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
SHOXO15266 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
SHOXO15266 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHOXO15266 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.95■□□□□ 0.94
SHOXO15266 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
SHOXO15266 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.95■□□□□ 0.94
SHOXO15266 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHOXO15266 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SHOXO15266 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.95■□□□□ 0.94
SHOXO15266 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHOXO15266 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHOXO15266 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.94■□□□□ 0.94
SHOXO15266 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.94■□□□□ 0.94
SHOXO15266 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SHOXO15266 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHOXO15266 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHOXO15266 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHOXO15266 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHOXO15266 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHOXO15266 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHOXO15266 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHOXO15266 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHOXO15266 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.92■□□□□ 0.94
SHOXO15266 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
SHOXO15266 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHOXO15266 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHOXO15266 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.91■□□□□ 0.94
SHOXO15266 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHOXO15266 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHOXO15266 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHOXO15266 SUZ12P1-203ENST00000578195 985 ntBASIC20.9■□□□□ 0.94
SHOXO15266 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHOXO15266 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.9■□□□□ 0.94
SHOXO15266 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHOXO15266 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SHOXO15266 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
SHOXO15266 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHOXO15266 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHOXO15266 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHOXO15266 AC005559.1-201ENST00000589661 871 ntBASIC20.89■□□□□ 0.93
SHOXO15266 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHOXO15266 BX255925.1-201ENST00000566954 1854 ntBASIC20.89■□□□□ 0.93
SHOXO15266 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
SHOXO15266 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.89■□□□□ 0.93
SHOXO15266 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHOXO15266 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SHOXO15266 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms