Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.5■■□□□ 1.51
CDC7O00311 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC7O00311 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.5■■□□□ 1.51
CDC7O00311 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC7O00311 ZNRF2P2-203ENST00000454624 420 ntBASIC24.49■■□□□ 1.51
CDC7O00311 DUX4L13-201ENST00000554103 1267 ntBASIC24.49■■□□□ 1.51
CDC7O00311 DUX4L15-201ENST00000611059 1267 ntBASIC24.49■■□□□ 1.51
CDC7O00311 DUX4L23-201ENST00000615195 1269 ntBASIC24.49■■□□□ 1.51
CDC7O00311 DUX4L24-201ENST00000617576 1269 ntBASIC24.49■■□□□ 1.51
CDC7O00311 DUX4L22-201ENST00000618238 1269 ntBASIC24.49■■□□□ 1.51
CDC7O00311 DUX4L20-201ENST00000619712 1269 ntBASIC24.49■■□□□ 1.51
CDC7O00311 DUX4L21-201ENST00000622058 1269 ntBASIC24.49■■□□□ 1.51
CDC7O00311 DUX4L10-201ENST00000622460 1267 ntBASIC24.49■■□□□ 1.51
CDC7O00311 DUX4L25-201ENST00000624915 1269 ntBASIC24.49■■□□□ 1.51
CDC7O00311 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDC7O00311 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.48■■□□□ 1.51
CDC7O00311 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CDC7O00311 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.47■■□□□ 1.51
CDC7O00311 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.47■■□□□ 1.51
CDC7O00311 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC7O00311 DUX4L11-201ENST00000611504 1267 ntBASIC24.47■■□□□ 1.51
CDC7O00311 DUX4L12-201ENST00000614593 1267 ntBASIC24.47■■□□□ 1.51
CDC7O00311 DUX4L14-201ENST00000621227 1267 ntBASIC24.47■■□□□ 1.51
CDC7O00311 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CDC7O00311 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDC7O00311 AL449106.1-201ENST00000608517 1980 ntBASIC24.46■■□□□ 1.51
CDC7O00311 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDC7O00311 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDC7O00311 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDC7O00311 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDC7O00311 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDC7O00311 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDC7O00311 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDC7O00311 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.44■■□□□ 1.5
CDC7O00311 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.44■■□□□ 1.5
CDC7O00311 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDC7O00311 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CDC7O00311 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.43■■□□□ 1.5
CDC7O00311 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.43■■□□□ 1.5
CDC7O00311 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.43■■□□□ 1.5
CDC7O00311 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.42■■□□□ 1.5
CDC7O00311 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.42■■□□□ 1.5
CDC7O00311 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CDC7O00311 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDC7O00311 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDC7O00311 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDC7O00311 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CDC7O00311 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
CDC7O00311 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CDC7O00311 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
CDC7O00311 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CDC7O00311 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDC7O00311 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CDC7O00311 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDC7O00311 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CDC7O00311 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.39■■□□□ 1.5
CDC7O00311 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
CDC7O00311 ABHD17AP4-201ENST00000411545 909 ntBASIC24.39■■□□□ 1.49
CDC7O00311 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.39■■□□□ 1.49
CDC7O00311 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDC7O00311 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDC7O00311 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDC7O00311 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CDC7O00311 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDC7O00311 WHAMMP3-201ENST00000611636 1609 ntBASIC24.37■■□□□ 1.49
CDC7O00311 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDC7O00311 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDC7O00311 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
CDC7O00311 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDC7O00311 AP004609.3-201ENST00000610705 1884 ntBASIC24.36■■□□□ 1.49
CDC7O00311 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDC7O00311 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.35■■□□□ 1.49
CDC7O00311 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDC7O00311 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.35■■□□□ 1.49
CDC7O00311 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.34■■□□□ 1.49
CDC7O00311 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
CDC7O00311 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDC7O00311 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDC7O00311 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.33■■□□□ 1.48
CDC7O00311 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDC7O00311 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.32■■□□□ 1.48
CDC7O00311 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
CDC7O00311 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDC7O00311 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDC7O00311 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDC7O00311 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CDC7O00311 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.31■■□□□ 1.48
CDC7O00311 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDC7O00311 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDC7O00311 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CDC7O00311 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.31■■□□□ 1.48
CDC7O00311 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.31■■□□□ 1.48
CDC7O00311 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.31■■□□□ 1.48
CDC7O00311 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.3■■□□□ 1.48
CDC7O00311 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.3■■□□□ 1.48
CDC7O00311 AC008813.1-201ENST00000536597 885 ntBASIC24.3■■□□□ 1.48
CDC7O00311 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDC7O00311 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDC7O00311 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.29■■□□□ 1.48
CDC7O00311 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 271.9 ms