Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV6-4A0A1B0GX49 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV6-4A0A1B0GX49 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV6-4A0A1B0GX49 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV6-4A0A1B0GX49 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV6-4A0A1B0GX49 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRBV6-4A0A1B0GX49 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV6-4A0A1B0GX49 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
TRBV6-4A0A1B0GX49 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.58■□□□□ 0.4
TRBV6-4A0A1B0GX49 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV6-4A0A1B0GX49 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-4A0A1B0GX49 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-4A0A1B0GX49 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.57■□□□□ 0.4
TRBV6-4A0A1B0GX49 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-4A0A1B0GX49 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV6-4A0A1B0GX49 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRBV6-4A0A1B0GX49 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV6-4A0A1B0GX49 AC008813.1-201ENST00000536597 885 ntBASIC17.56■□□□□ 0.4
TRBV6-4A0A1B0GX49 DUX4L11-201ENST00000611504 1267 ntBASIC17.56■□□□□ 0.4
TRBV6-4A0A1B0GX49 DUX4L12-201ENST00000614593 1267 ntBASIC17.56■□□□□ 0.4
TRBV6-4A0A1B0GX49 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.56■□□□□ 0.4
TRBV6-4A0A1B0GX49 DUX4L14-201ENST00000621227 1267 ntBASIC17.56■□□□□ 0.4
TRBV6-4A0A1B0GX49 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-4A0A1B0GX49 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV6-4A0A1B0GX49 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-4A0A1B0GX49 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV6-4A0A1B0GX49 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV6-4A0A1B0GX49 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV6-4A0A1B0GX49 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRBV6-4A0A1B0GX49 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBV6-4A0A1B0GX49 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV6-4A0A1B0GX49 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.54■□□□□ 0.4
TRBV6-4A0A1B0GX49 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-4A0A1B0GX49 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-4A0A1B0GX49 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-4A0A1B0GX49 ZNRF2P2-203ENST00000454624 420 ntBASIC17.54■□□□□ 0.4
TRBV6-4A0A1B0GX49 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV6-4A0A1B0GX49 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.54■□□□□ 0.4
TRBV6-4A0A1B0GX49 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-4A0A1B0GX49 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRBV6-4A0A1B0GX49 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.53■□□□□ 0.4
TRBV6-4A0A1B0GX49 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-4A0A1B0GX49 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-4A0A1B0GX49 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRBV6-4A0A1B0GX49 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-4A0A1B0GX49 WHAMMP3-201ENST00000611636 1609 ntBASIC17.53■□□□□ 0.4
TRBV6-4A0A1B0GX49 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.53■□□□□ 0.4
TRBV6-4A0A1B0GX49 AL449106.1-201ENST00000608517 1980 ntBASIC17.52■□□□□ 0.4
TRBV6-4A0A1B0GX49 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.52■□□□□ 0.4
TRBV6-4A0A1B0GX49 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.51■□□□□ 0.39
TRBV6-4A0A1B0GX49 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-4A0A1B0GX49 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-4A0A1B0GX49 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-4A0A1B0GX49 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-4A0A1B0GX49 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.5■□□□□ 0.39
TRBV6-4A0A1B0GX49 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRBV6-4A0A1B0GX49 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-4A0A1B0GX49 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-4A0A1B0GX49 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-4A0A1B0GX49 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-4A0A1B0GX49 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.49■□□□□ 0.39
TRBV6-4A0A1B0GX49 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRBV6-4A0A1B0GX49 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRBV6-4A0A1B0GX49 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.49■□□□□ 0.39
TRBV6-4A0A1B0GX49 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TRBV6-4A0A1B0GX49 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-4A0A1B0GX49 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-4A0A1B0GX49 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-4A0A1B0GX49 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV6-4A0A1B0GX49 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-4A0A1B0GX49 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-4A0A1B0GX49 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-4A0A1B0GX49 AP004609.3-201ENST00000610705 1884 ntBASIC17.48■□□□□ 0.39
TRBV6-4A0A1B0GX49 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV6-4A0A1B0GX49 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRBV6-4A0A1B0GX49 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.47■□□□□ 0.39
TRBV6-4A0A1B0GX49 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-4A0A1B0GX49 AC148477.6-201ENST00000623746 465 ntBASIC17.47■□□□□ 0.39
TRBV6-4A0A1B0GX49 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-4A0A1B0GX49 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV6-4A0A1B0GX49 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.46■□□□□ 0.39
TRBV6-4A0A1B0GX49 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-4A0A1B0GX49 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-4A0A1B0GX49 ABHD17AP4-201ENST00000411545 909 ntBASIC17.46■□□□□ 0.39
TRBV6-4A0A1B0GX49 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV6-4A0A1B0GX49 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.46■□□□□ 0.39
TRBV6-4A0A1B0GX49 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.46■□□□□ 0.39
TRBV6-4A0A1B0GX49 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.46■□□□□ 0.39
TRBV6-4A0A1B0GX49 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-4A0A1B0GX49 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV6-4A0A1B0GX49 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
TRBV6-4A0A1B0GX49 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-4A0A1B0GX49 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-4A0A1B0GX49 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-4A0A1B0GX49 AC142472.1-201ENST00000612013 1741 ntBASIC17.45■□□□□ 0.38
TRBV6-4A0A1B0GX49 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-4A0A1B0GX49 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-4A0A1B0GX49 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV6-4A0A1B0GX49 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV6-4A0A1B0GX49 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms