Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TRAV20A0A0B4J274 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.96■□□□□ 0.95
TRAV20A0A0B4J274 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.96■□□□□ 0.95
TRAV20A0A0B4J274 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV20A0A0B4J274 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TRAV20A0A0B4J274 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV20A0A0B4J274 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV20A0A0B4J274 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.95■□□□□ 0.94
TRAV20A0A0B4J274 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAV20A0A0B4J274 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.95■□□□□ 0.94
TRAV20A0A0B4J274 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV20A0A0B4J274 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV20A0A0B4J274 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.95■□□□□ 0.94
TRAV20A0A0B4J274 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV20A0A0B4J274 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
TRAV20A0A0B4J274 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV20A0A0B4J274 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV20A0A0B4J274 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAV20A0A0B4J274 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV20A0A0B4J274 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.94■□□□□ 0.94
TRAV20A0A0B4J274 MIR219A2-201ENST00000608502 1504 ntBASIC20.94■□□□□ 0.94
TRAV20A0A0B4J274 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAV20A0A0B4J274 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV20A0A0B4J274 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TRAV20A0A0B4J274 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAV20A0A0B4J274 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV20A0A0B4J274 AP004833.2-201ENST00000532228 1454 ntBASIC20.93■□□□□ 0.94
TRAV20A0A0B4J274 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV20A0A0B4J274 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRAV20A0A0B4J274 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV20A0A0B4J274 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRAV20A0A0B4J274 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV20A0A0B4J274 AC060814.1-201ENST00000554326 538 ntBASIC20.92■□□□□ 0.94
TRAV20A0A0B4J274 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV20A0A0B4J274 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV20A0A0B4J274 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV20A0A0B4J274 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV20A0A0B4J274 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV20A0A0B4J274 AC126177.7-201ENST00000547904 679 ntBASIC20.91■□□□□ 0.94
TRAV20A0A0B4J274 NTF6A-201ENST00000591175 560 ntBASIC20.91■□□□□ 0.94
TRAV20A0A0B4J274 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV20A0A0B4J274 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRAV20A0A0B4J274 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAV20A0A0B4J274 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV20A0A0B4J274 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV20A0A0B4J274 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV20A0A0B4J274 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.9■□□□□ 0.94
TRAV20A0A0B4J274 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAV20A0A0B4J274 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAV20A0A0B4J274 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAV20A0A0B4J274 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV20A0A0B4J274 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.88■□□□□ 0.93
TRAV20A0A0B4J274 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV20A0A0B4J274 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV20A0A0B4J274 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRAV20A0A0B4J274 ST7-AS1-201ENST00000456775 1889 ntBASIC20.88■□□□□ 0.93
TRAV20A0A0B4J274 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV20A0A0B4J274 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.87■□□□□ 0.93
TRAV20A0A0B4J274 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV20A0A0B4J274 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV20A0A0B4J274 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV20A0A0B4J274 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV20A0A0B4J274 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV20A0A0B4J274 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.86■□□□□ 0.93
TRAV20A0A0B4J274 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV20A0A0B4J274 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.84■□□□□ 0.93
TRAV20A0A0B4J274 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV20A0A0B4J274 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV20A0A0B4J274 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TRAV20A0A0B4J274 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV20A0A0B4J274 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.84■□□□□ 0.93
TRAV20A0A0B4J274 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV20A0A0B4J274 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TRAV20A0A0B4J274 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV20A0A0B4J274 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAV20A0A0B4J274 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV20A0A0B4J274 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TRAV20A0A0B4J274 AC012354.3-201ENST00000623734 483 ntBASIC20.83■□□□□ 0.93
TRAV20A0A0B4J274 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV20A0A0B4J274 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.83■□□□□ 0.93
TRAV20A0A0B4J274 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.82■□□□□ 0.92
TRAV20A0A0B4J274 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV20A0A0B4J274 AC092296.2-201ENST00000589470 999 ntBASIC20.82■□□□□ 0.92
TRAV20A0A0B4J274 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRAV20A0A0B4J274 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV20A0A0B4J274 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV20A0A0B4J274 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV20A0A0B4J274 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.81■□□□□ 0.92
TRAV20A0A0B4J274 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV20A0A0B4J274 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.81■□□□□ 0.92
TRAV20A0A0B4J274 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.81■□□□□ 0.92
TRAV20A0A0B4J274 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAV20A0A0B4J274 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAV20A0A0B4J274 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV20A0A0B4J274 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV20A0A0B4J274 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV20A0A0B4J274 ECEL1P2-201ENST00000461596 1295 ntBASIC20.8■□□□□ 0.92
TRAV20A0A0B4J274 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV20A0A0B4J274 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAV20A0A0B4J274 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms