Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV9-1A0A075B6T8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV9-1A0A075B6T8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV9-1A0A075B6T8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV9-1A0A075B6T8 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAV9-1A0A075B6T8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAV9-1A0A075B6T8 AC133561.1-201ENST00000568600 2415 ntBASIC18.77■□□□□ 0.6
TRAV9-1A0A075B6T8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV9-1A0A075B6T8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV9-1A0A075B6T8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.77■□□□□ 0.6
TRAV9-1A0A075B6T8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAV9-1A0A075B6T8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV9-1A0A075B6T8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV9-1A0A075B6T8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV9-1A0A075B6T8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV9-1A0A075B6T8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV9-1A0A075B6T8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV9-1A0A075B6T8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV9-1A0A075B6T8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV9-1A0A075B6T8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV9-1A0A075B6T8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV9-1A0A075B6T8 AC142381.3-201ENST00000568208 1670 ntBASIC18.76■□□□□ 0.59
TRAV9-1A0A075B6T8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRAV9-1A0A075B6T8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV9-1A0A075B6T8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV9-1A0A075B6T8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV9-1A0A075B6T8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV9-1A0A075B6T8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV9-1A0A075B6T8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV9-1A0A075B6T8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV9-1A0A075B6T8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV9-1A0A075B6T8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.74■□□□□ 0.59
TRAV9-1A0A075B6T8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV9-1A0A075B6T8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV9-1A0A075B6T8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV9-1A0A075B6T8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV9-1A0A075B6T8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRAV9-1A0A075B6T8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRAV9-1A0A075B6T8 AC079834.2-201ENST00000609776 1949 ntBASIC18.73■□□□□ 0.59
TRAV9-1A0A075B6T8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV9-1A0A075B6T8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV9-1A0A075B6T8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRAV9-1A0A075B6T8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV9-1A0A075B6T8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV9-1A0A075B6T8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV9-1A0A075B6T8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRAV9-1A0A075B6T8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV9-1A0A075B6T8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV9-1A0A075B6T8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV9-1A0A075B6T8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV9-1A0A075B6T8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.71■□□□□ 0.58
TRAV9-1A0A075B6T8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.71■□□□□ 0.58
TRAV9-1A0A075B6T8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV9-1A0A075B6T8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV9-1A0A075B6T8 AC018358.1-201ENST00000631079 1402 ntBASIC18.7■□□□□ 0.58
TRAV9-1A0A075B6T8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAV9-1A0A075B6T8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRAV9-1A0A075B6T8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAV9-1A0A075B6T8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRAV9-1A0A075B6T8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV9-1A0A075B6T8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRAV9-1A0A075B6T8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV9-1A0A075B6T8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV9-1A0A075B6T8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV9-1A0A075B6T8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRAV9-1A0A075B6T8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV9-1A0A075B6T8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRAV9-1A0A075B6T8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV9-1A0A075B6T8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV9-1A0A075B6T8 AC100797.4-201ENST00000631653 1827 ntBASIC18.68■□□□□ 0.58
TRAV9-1A0A075B6T8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV9-1A0A075B6T8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV9-1A0A075B6T8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV9-1A0A075B6T8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TRAV9-1A0A075B6T8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV9-1A0A075B6T8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRAV9-1A0A075B6T8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV9-1A0A075B6T8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV9-1A0A075B6T8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV9-1A0A075B6T8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV9-1A0A075B6T8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV9-1A0A075B6T8 WASH5P-204ENST00000632292 975 ntBASIC18.67■□□□□ 0.58
TRAV9-1A0A075B6T8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV9-1A0A075B6T8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV9-1A0A075B6T8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV9-1A0A075B6T8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV9-1A0A075B6T8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV9-1A0A075B6T8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV9-1A0A075B6T8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV9-1A0A075B6T8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRAV9-1A0A075B6T8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRAV9-1A0A075B6T8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV9-1A0A075B6T8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV9-1A0A075B6T8 AL139125.2-201ENST00000623134 1869 ntBASIC18.65■□□□□ 0.58
TRAV9-1A0A075B6T8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV9-1A0A075B6T8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV9-1A0A075B6T8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV9-1A0A075B6T8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV9-1A0A075B6T8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV9-1A0A075B6T8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms