Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.85■□□□□ 0.61
FNDC3AQ9Y2H6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.85■□□□□ 0.61
FNDC3AQ9Y2H6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.85■□□□□ 0.61
FNDC3AQ9Y2H6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
FNDC3AQ9Y2H6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FNDC3AQ9Y2H6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
FNDC3AQ9Y2H6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FNDC3AQ9Y2H6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FNDC3AQ9Y2H6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
FNDC3AQ9Y2H6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FNDC3AQ9Y2H6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FNDC3AQ9Y2H6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 AL136038.3-201ENST00000561909 1096 ntBASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 AC083849.1-201ENST00000615227 514 ntBASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 AC093503.3-201ENST00000624917 2352 ntBASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FNDC3AQ9Y2H6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FNDC3AQ9Y2H6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FNDC3AQ9Y2H6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
FNDC3AQ9Y2H6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FNDC3AQ9Y2H6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.83■□□□□ 0.61
FNDC3AQ9Y2H6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
FNDC3AQ9Y2H6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
FNDC3AQ9Y2H6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FNDC3AQ9Y2H6 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.83■□□□□ 0.6
FNDC3AQ9Y2H6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FNDC3AQ9Y2H6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.83■□□□□ 0.6
FNDC3AQ9Y2H6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.83■□□□□ 0.6
FNDC3AQ9Y2H6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
FNDC3AQ9Y2H6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.83■□□□□ 0.6
FNDC3AQ9Y2H6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FNDC3AQ9Y2H6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.83■□□□□ 0.6
FNDC3AQ9Y2H6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FNDC3AQ9Y2H6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FNDC3AQ9Y2H6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
FNDC3AQ9Y2H6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 AP000523.1-201ENST00000398242 1049 ntBASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 ZNF444P1-201ENST00000559497 298 ntBASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
FNDC3AQ9Y2H6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 RCC2P3-201ENST00000418112 1537 ntBASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FNDC3AQ9Y2H6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms