Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
GTF3C4Q9UKN8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 AL354751.1-201ENST00000412768 1863 ntBASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
GTF3C4Q9UKN8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 AL499627.1-201ENST00000569373 2188 ntBASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 MIR564-202ENST00000385049 94 ntBASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GTF3C4Q9UKN8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 STARP1-201ENST00000397973 869 ntBASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 SPDYE15P-201ENST00000424157 909 ntBASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 AC112497.1-201ENST00000624824 639 ntBASIC19.83■□□□□ 0.77
GTF3C4Q9UKN8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
GTF3C4Q9UKN8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GTF3C4Q9UKN8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GTF3C4Q9UKN8 AL357033.4-201ENST00000617703 1807 ntBASIC19.83■□□□□ 0.76
GTF3C4Q9UKN8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.83■□□□□ 0.76
GTF3C4Q9UKN8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
GTF3C4Q9UKN8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
GTF3C4Q9UKN8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
GTF3C4Q9UKN8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GTF3C4Q9UKN8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF3C4Q9UKN8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms