Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC018470.1-201ENST00000624790 3129 ntBASIC16.83■□□□□ 0.29
CHRNA9Q9UGM1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.83■□□□□ 0.29
CHRNA9Q9UGM1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA9Q9UGM1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 NOC2LP2-201ENST00000407594 1944 ntBASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 AP000593.1-201ENST00000393668 712 ntBASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA9Q9UGM1 AC026471.1-201ENST00000564629 3026 ntBASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 AL133373.2-201ENST00000623187 2828 ntBASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 LETM1P2-201ENST00000597330 2178 ntBASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA9Q9UGM1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA9Q9UGM1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA9Q9UGM1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA9Q9UGM1 KRT8P7-201ENST00000533003 1432 ntBASIC16.8■□□□□ 0.28
CHRNA9Q9UGM1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNA9Q9UGM1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CHRNA9Q9UGM1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA9Q9UGM1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms