Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COMMD3Q9UBI1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COMMD3Q9UBI1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 AC112777.1-201ENST00000540175 1423 ntBASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COMMD3Q9UBI1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 AL139384.1-201ENST00000612143 3047 ntBASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.21■□□□□ 0.19
COMMD3Q9UBI1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms