Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.26■□□□□ 0.51
NCDNQ9UBB6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.26■□□□□ 0.51
NCDNQ9UBB6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 KRT18P28-201ENST00000453838 1332 ntBASIC18.25■□□□□ 0.51
NCDNQ9UBB6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 AC092910.1-201ENST00000482027 1129 ntBASIC18.25■□□□□ 0.51
NCDNQ9UBB6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 AC034105.1-201ENST00000563488 319 ntBASIC18.25■□□□□ 0.51
NCDNQ9UBB6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 ZNF815P-204ENST00000434898 1737 ntBASIC18.25■□□□□ 0.51
NCDNQ9UBB6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.25■□□□□ 0.51
NCDNQ9UBB6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.25■□□□□ 0.51
NCDNQ9UBB6 AC112907.3-201ENST00000577781 2400 ntBASIC18.24■□□□□ 0.51
NCDNQ9UBB6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 HLA-J-201ENST00000462773 1622 ntBASIC18.24■□□□□ 0.51
NCDNQ9UBB6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 RNA5SP416-201ENST00000516838 111 ntBASIC18.24■□□□□ 0.51
NCDNQ9UBB6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 Z83851.2-201ENST00000609564 659 ntBASIC18.24■□□□□ 0.51
NCDNQ9UBB6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.24■□□□□ 0.51
NCDNQ9UBB6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 AL109659.2-201ENST00000606809 1674 ntBASIC18.24■□□□□ 0.51
NCDNQ9UBB6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCDNQ9UBB6 AC007952.6-201ENST00000573168 2673 ntBASIC18.24■□□□□ 0.51
NCDNQ9UBB6 AC003957.1-201ENST00000625108 2673 ntBASIC18.24■□□□□ 0.51
NCDNQ9UBB6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 AC099778.1-201ENST00000568593 1911 ntBASIC18.23■□□□□ 0.51
NCDNQ9UBB6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 TREX1-205ENST00000625293 1783 ntBASIC18.23■□□□□ 0.51
NCDNQ9UBB6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 METTL21AP1-201ENST00000438852 635 ntBASIC18.23■□□□□ 0.51
NCDNQ9UBB6 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.23■□□□□ 0.51
NCDNQ9UBB6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.23■□□□□ 0.51
NCDNQ9UBB6 AC092364.2-202ENST00000597012 1073 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms