Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 AL024508.2-201ENST00000607749 1894 ntBASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 SPDYE13P-201ENST00000445314 798 ntBASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 KRT18P35-201ENST00000510488 1269 ntBASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM248Q9NWD8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 GMCL1P1-201ENST00000463439 1581 ntBASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 ZNF444P1-201ENST00000559497 298 ntBASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 AL445228.2-201ENST00000605589 952 ntBASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM248Q9NWD8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 MIR662-201ENST00000384847 95 ntBASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 VENTXP5-201ENST00000523979 775 ntBASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 AL121956.5-201ENST00000625261 221 ntBASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 AC009113.1-201ENST00000570267 2443 ntBASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM248Q9NWD8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 AC087388.1-201ENST00000571370 1112 ntBASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 AC024563.2-201ENST00000603282 481 ntBASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM248Q9NWD8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms