Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 AC009086.3-201ENST00000623486 1008 ntBASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 PPP1R26P4-201ENST00000619065 3527 ntBASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 AL513523.2-202ENST00000427283 2040 ntBASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 AC126177.1-201ENST00000547829 2218 ntBASIC9.46□□□□□ -0.9
CDC42SE1Q9NRR8 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 GRK6P1-201ENST00000400595 1711 ntBASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 OR2I1P-209ENST00000641730 5365 ntBASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 AC097376.2-205ENST00000610159 5334 ntBASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDC42SE1Q9NRR8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 CR383656.2-201ENST00000548656 2254 ntBASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDC42SE1Q9NRR8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms