Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD248Q9HCU0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD248Q9HCU0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.36■□□□□ 0.69
CD248Q9HCU0 UPK3BP1-201ENST00000428678 509 ntBASIC19.36■□□□□ 0.69
CD248Q9HCU0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD248Q9HCU0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.36■□□□□ 0.69
CD248Q9HCU0 FAM86EP-206ENST00000510506 987 ntBASIC19.36■□□□□ 0.69
CD248Q9HCU0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD248Q9HCU0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.36■□□□□ 0.69
CD248Q9HCU0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.36■□□□□ 0.69
CD248Q9HCU0 AC008622.2-201ENST00000617006 1229 ntBASIC19.36■□□□□ 0.69
CD248Q9HCU0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CD248Q9HCU0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD248Q9HCU0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.36■□□□□ 0.69
CD248Q9HCU0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.36■□□□□ 0.69
CD248Q9HCU0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD248Q9HCU0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CD248Q9HCU0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD248Q9HCU0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CD248Q9HCU0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.36■□□□□ 0.69
CD248Q9HCU0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.36■□□□□ 0.69
CD248Q9HCU0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CD248Q9HCU0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.35■□□□□ 0.69
CD248Q9HCU0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD248Q9HCU0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.35■□□□□ 0.69
CD248Q9HCU0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD248Q9HCU0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CD248Q9HCU0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.35■□□□□ 0.69
CD248Q9HCU0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD248Q9HCU0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.35■□□□□ 0.69
CD248Q9HCU0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD248Q9HCU0 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.35■□□□□ 0.69
CD248Q9HCU0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CD248Q9HCU0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.35■□□□□ 0.69
CD248Q9HCU0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD248Q9HCU0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.35■□□□□ 0.69
CD248Q9HCU0 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.35■□□□□ 0.69
CD248Q9HCU0 PRSS44-201ENST00000515154 1146 ntBASIC19.35■□□□□ 0.69
CD248Q9HCU0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.35■□□□□ 0.69
CD248Q9HCU0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.35■□□□□ 0.69
CD248Q9HCU0 AL023973.1-201ENST00000624619 620 ntBASIC19.35■□□□□ 0.69
CD248Q9HCU0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.35■□□□□ 0.69
CD248Q9HCU0 AL031432.5-201ENST00000641059 760 ntBASIC19.35■□□□□ 0.69
CD248Q9HCU0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD248Q9HCU0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD248Q9HCU0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.35■□□□□ 0.69
CD248Q9HCU0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD248Q9HCU0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CD248Q9HCU0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD248Q9HCU0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD248Q9HCU0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.35■□□□□ 0.69
CD248Q9HCU0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD248Q9HCU0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD248Q9HCU0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.34■□□□□ 0.69
CD248Q9HCU0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.34■□□□□ 0.69
CD248Q9HCU0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD248Q9HCU0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.34■□□□□ 0.69
CD248Q9HCU0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD248Q9HCU0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD248Q9HCU0 HOMER2P1-201ENST00000455653 964 ntBASIC19.34■□□□□ 0.69
CD248Q9HCU0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD248Q9HCU0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.34■□□□□ 0.69
CD248Q9HCU0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.34■□□□□ 0.69
CD248Q9HCU0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CD248Q9HCU0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.34■□□□□ 0.69
CD248Q9HCU0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.34■□□□□ 0.69
CD248Q9HCU0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD248Q9HCU0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.34■□□□□ 0.69
CD248Q9HCU0 AL121956.5-201ENST00000625261 221 ntBASIC19.34■□□□□ 0.69
CD248Q9HCU0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD248Q9HCU0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD248Q9HCU0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CD248Q9HCU0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD248Q9HCU0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD248Q9HCU0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD248Q9HCU0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD248Q9HCU0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.34■□□□□ 0.69
CD248Q9HCU0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.34■□□□□ 0.69
CD248Q9HCU0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD248Q9HCU0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD248Q9HCU0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD248Q9HCU0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD248Q9HCU0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.33■□□□□ 0.69
CD248Q9HCU0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD248Q9HCU0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CD248Q9HCU0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.33■□□□□ 0.68
CD248Q9HCU0 KRT18P38-201ENST00000449496 1282 ntBASIC19.33■□□□□ 0.68
CD248Q9HCU0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.33■□□□□ 0.68
CD248Q9HCU0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.33■□□□□ 0.68
CD248Q9HCU0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.33■□□□□ 0.68
CD248Q9HCU0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.33■□□□□ 0.68
CD248Q9HCU0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.33■□□□□ 0.68
CD248Q9HCU0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.33■□□□□ 0.68
CD248Q9HCU0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.33■□□□□ 0.68
CD248Q9HCU0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.33■□□□□ 0.68
CD248Q9HCU0 AP000550.4-202ENST00000639755 178 ntBASIC19.33■□□□□ 0.68
CD248Q9HCU0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD248Q9HCU0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CD248Q9HCU0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.33■□□□□ 0.68
CD248Q9HCU0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms