Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 EGLN1P1-201ENST00000531623 762 ntBASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRRC40Q9H9A6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 KRT18P23-201ENST00000435622 1283 ntBASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRRC40Q9H9A6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 TSPY15P-201ENST00000457163 923 ntBASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 AC128688.1-201ENST00000487626 519 ntBASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 AC135776.1-201ENST00000319817 2481 ntBASIC18.72■□□□□ 0.59
LRRC40Q9H9A6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 NAPSB-206ENST00000562112 1266 ntBASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC40Q9H9A6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
LRRC40Q9H9A6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 NOC2LP2-201ENST00000407594 1944 ntBASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms