Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.46■■□□□ 1.03
SH2D4AQ9H788 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
SH2D4AQ9H788 AC104819.1-201ENST00000504587 486 ntBASIC21.46■■□□□ 1.03
SH2D4AQ9H788 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.46■■□□□ 1.03
SH2D4AQ9H788 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.46■■□□□ 1.03
SH2D4AQ9H788 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SH2D4AQ9H788 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.46■■□□□ 1.03
SH2D4AQ9H788 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SH2D4AQ9H788 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SH2D4AQ9H788 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SH2D4AQ9H788 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH2D4AQ9H788 AL353692.3-201ENST00000407031 1396 ntBASIC21.46■■□□□ 1.03
SH2D4AQ9H788 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SH2D4AQ9H788 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH2D4AQ9H788 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SH2D4AQ9H788 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SH2D4AQ9H788 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 VENTXP7-201ENST00000475503 772 ntBASIC21.45■■□□□ 1.02
SH2D4AQ9H788 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 Z69720.1-201ENST00000601483 472 ntBASIC21.45■■□□□ 1.02
SH2D4AQ9H788 AL121772.3-201ENST00000610840 674 ntBASIC21.45■■□□□ 1.02
SH2D4AQ9H788 AL592071.1-201ENST00000611956 408 ntBASIC21.45■■□□□ 1.02
SH2D4AQ9H788 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SH2D4AQ9H788 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 AC004870.1-201ENST00000315132 882 ntBASIC21.44■■□□□ 1.02
SH2D4AQ9H788 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 AC009102.3-201ENST00000623118 1491 ntBASIC21.44■■□□□ 1.02
SH2D4AQ9H788 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SH2D4AQ9H788 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 FAAHP1-202ENST00000446499 1238 ntBASIC21.43■■□□□ 1.02
SH2D4AQ9H788 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 RN7SL510P-201ENST00000581311 263 ntBASIC21.43■■□□□ 1.02
SH2D4AQ9H788 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 AC112777.1-201ENST00000540175 1423 ntBASIC21.43■■□□□ 1.02
SH2D4AQ9H788 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SH2D4AQ9H788 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms