Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 RARRES2P10-201ENST00000564312 460 ntBASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 AC073195.1-201ENST00000607241 877 ntBASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 MIR6786-201ENST00000616843 113 ntBASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PHACTR1Q9C0D0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 PHGDH-209ENST00000641074 1780 ntBASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 ESRRAP1-201ENST00000400596 1257 ntBASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHACTR1Q9C0D0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 AC011270.2-201ENST00000624293 2550 ntBASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 AC011506.1-201ENST00000474329 610 ntBASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 CD99P1-205ENST00000527459 561 ntBASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 FSCN1P1-201ENST00000568912 1481 ntBASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
PHACTR1Q9C0D0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 CA15P1-201ENST00000481698 905 ntBASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 AF186192.3-201ENST00000583427 947 ntBASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 CR392000.1-201ENST00000624770 1228 ntBASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PHACTR1Q9C0D0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHACTR1Q9C0D0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms