Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AL109659.2-201ENST00000606809 1674 ntBASIC14.36□□□□□ -0.11
DUX3Q96PT4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
DUX3Q96PT4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.36□□□□□ -0.11
DUX3Q96PT4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.35□□□□□ -0.11
DUX3Q96PT4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
DUX3Q96PT4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.35□□□□□ -0.11
DUX3Q96PT4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
DUX3Q96PT4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 HBZP1-201ENST00000354915 429 ntBASIC14.35□□□□□ -0.11
DUX3Q96PT4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 SPDYE13P-201ENST00000445314 798 ntBASIC14.35□□□□□ -0.11
DUX3Q96PT4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.35□□□□□ -0.11
DUX3Q96PT4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.35□□□□□ -0.11
DUX3Q96PT4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.35□□□□□ -0.11
DUX3Q96PT4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.35□□□□□ -0.11
DUX3Q96PT4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
DUX3Q96PT4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.35□□□□□ -0.11
DUX3Q96PT4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.35□□□□□ -0.11
DUX3Q96PT4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.35□□□□□ -0.11
DUX3Q96PT4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
DUX3Q96PT4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.35□□□□□ -0.11
DUX3Q96PT4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.35□□□□□ -0.11
DUX3Q96PT4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 KRT8P32-201ENST00000512863 1461 ntBASIC14.34□□□□□ -0.11
DUX3Q96PT4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 AL136038.3-201ENST00000561909 1096 ntBASIC14.34□□□□□ -0.11
DUX3Q96PT4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 AC116407.4-201ENST00000623319 1061 ntBASIC14.34□□□□□ -0.11
DUX3Q96PT4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 AC005332.7-201ENST00000614046 2005 ntBASIC14.34□□□□□ -0.11
DUX3Q96PT4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
DUX3Q96PT4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DUX3Q96PT4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
DUX3Q96PT4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
DUX3Q96PT4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.33□□□□□ -0.11
DUX3Q96PT4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.33□□□□□ -0.11
DUX3Q96PT4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.33□□□□□ -0.11
DUX3Q96PT4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
DUX3Q96PT4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.33□□□□□ -0.11
DUX3Q96PT4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DUX3Q96PT4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DUX3Q96PT4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.33□□□□□ -0.11
DUX3Q96PT4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
DUX3Q96PT4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
DUX3Q96PT4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.33□□□□□ -0.12
DUX3Q96PT4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
DUX3Q96PT4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
DUX3Q96PT4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DUX3Q96PT4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms