Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.34■□□□□ 0.05
GAFA1Q96PS6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
GAFA1Q96PS6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GAFA1Q96PS6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GAFA1Q96PS6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 HOMER2P1-201ENST00000455653 964 ntBASIC15.33■□□□□ 0.04
GAFA1Q96PS6 DUX4L26-201ENST00000489078 1255 ntBASIC15.33■□□□□ 0.04
GAFA1Q96PS6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.33■□□□□ 0.04
GAFA1Q96PS6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 STARP1-201ENST00000397973 869 ntBASIC15.32■□□□□ 0.04
GAFA1Q96PS6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 KRT18P38-201ENST00000449496 1282 ntBASIC15.32■□□□□ 0.04
GAFA1Q96PS6 AC092647.4-201ENST00000457211 535 ntBASIC15.32■□□□□ 0.04
GAFA1Q96PS6 AL359075.1-203ENST00000462729 1002 ntBASIC15.32■□□□□ 0.04
GAFA1Q96PS6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GAFA1Q96PS6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.31■□□□□ 0.04
GAFA1Q96PS6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms