Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CALR3Q96L12 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CALR3Q96L12 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CALR3Q96L12 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CALR3Q96L12 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.52■□□□□ 0.72
CALR3Q96L12 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
CALR3Q96L12 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.52■□□□□ 0.72
CALR3Q96L12 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.52■□□□□ 0.72
CALR3Q96L12 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CALR3Q96L12 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CALR3Q96L12 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CALR3Q96L12 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CALR3Q96L12 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CALR3Q96L12 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CALR3Q96L12 AL023284.2-201ENST00000405850 579 ntBASIC19.52■□□□□ 0.72
CALR3Q96L12 RPPH1-201ENST00000516869 333 ntBASIC19.52■□□□□ 0.72
CALR3Q96L12 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CALR3Q96L12 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.52■□□□□ 0.72
CALR3Q96L12 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
CALR3Q96L12 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CALR3Q96L12 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CALR3Q96L12 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CALR3Q96L12 LINC00896-202ENST00000609602 2128 ntBASIC19.52■□□□□ 0.72
CALR3Q96L12 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CALR3Q96L12 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CALR3Q96L12 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CALR3Q96L12 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CALR3Q96L12 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CALR3Q96L12 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CALR3Q96L12 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CALR3Q96L12 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CALR3Q96L12 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CALR3Q96L12 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CALR3Q96L12 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CALR3Q96L12 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CALR3Q96L12 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CALR3Q96L12 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.51■□□□□ 0.71
CALR3Q96L12 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CALR3Q96L12 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CALR3Q96L12 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CALR3Q96L12 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.51■□□□□ 0.71
CALR3Q96L12 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CALR3Q96L12 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CALR3Q96L12 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.51■□□□□ 0.71
CALR3Q96L12 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CALR3Q96L12 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CALR3Q96L12 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.51■□□□□ 0.71
CALR3Q96L12 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.51■□□□□ 0.71
CALR3Q96L12 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CALR3Q96L12 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.5■□□□□ 0.71
CALR3Q96L12 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.5■□□□□ 0.71
CALR3Q96L12 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CALR3Q96L12 AC134043.2-201ENST00000624206 2238 ntBASIC19.5■□□□□ 0.71
CALR3Q96L12 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.5■□□□□ 0.71
CALR3Q96L12 MESTP1-201ENST00000404287 994 ntBASIC19.5■□□□□ 0.71
CALR3Q96L12 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.5■□□□□ 0.71
CALR3Q96L12 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.5■□□□□ 0.71
CALR3Q96L12 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.5■□□□□ 0.71
CALR3Q96L12 AC008622.2-201ENST00000617006 1229 ntBASIC19.5■□□□□ 0.71
CALR3Q96L12 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.5■□□□□ 0.71
CALR3Q96L12 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.5■□□□□ 0.71
CALR3Q96L12 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CALR3Q96L12 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CALR3Q96L12 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CALR3Q96L12 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CALR3Q96L12 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CALR3Q96L12 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CALR3Q96L12 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALR3Q96L12 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CALR3Q96L12 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CALR3Q96L12 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CALR3Q96L12 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALR3Q96L12 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CALR3Q96L12 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.49■□□□□ 0.71
CALR3Q96L12 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALR3Q96L12 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.49■□□□□ 0.71
CALR3Q96L12 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALR3Q96L12 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CALR3Q96L12 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.49■□□□□ 0.71
CALR3Q96L12 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.49■□□□□ 0.71
CALR3Q96L12 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms