Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF4Q92544 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF4Q92544 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF4Q92544 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF4Q92544 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF4Q92544 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF4Q92544 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF4Q92544 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF4Q92544 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 AC083849.1-201ENST00000615227 514 ntBASIC17.4■□□□□ 0.38
TM9SF4Q92544 ZNF815P-204ENST00000434898 1737 ntBASIC17.4■□□□□ 0.38
TM9SF4Q92544 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF4Q92544 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF4Q92544 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF4Q92544 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF4Q92544 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF4Q92544 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF4Q92544 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TM9SF4Q92544 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TM9SF4Q92544 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TM9SF4Q92544 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
TM9SF4Q92544 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.39■□□□□ 0.38
TM9SF4Q92544 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 AC135050.7-201ENST00000624508 2218 ntBASIC17.39■□□□□ 0.37
TM9SF4Q92544 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 AL390961.4-201ENST00000623958 2535 ntBASIC17.39■□□□□ 0.37
TM9SF4Q92544 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 AC104417.2-201ENST00000562989 1793 ntBASIC17.39■□□□□ 0.37
TM9SF4Q92544 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 TPM4P1-201ENST00000436100 807 ntBASIC17.39■□□□□ 0.37
TM9SF4Q92544 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.39■□□□□ 0.37
TM9SF4Q92544 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
TM9SF4Q92544 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.39■□□□□ 0.37
TM9SF4Q92544 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.39■□□□□ 0.37
TM9SF4Q92544 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.39■□□□□ 0.37
TM9SF4Q92544 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.39■□□□□ 0.37
TM9SF4Q92544 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.39■□□□□ 0.37
TM9SF4Q92544 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TM9SF4Q92544 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.39■□□□□ 0.37
TM9SF4Q92544 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.39■□□□□ 0.37
TM9SF4Q92544 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TM9SF4Q92544 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.39■□□□□ 0.37
TM9SF4Q92544 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.39■□□□□ 0.37
TM9SF4Q92544 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.39■□□□□ 0.37
TM9SF4Q92544 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TM9SF4Q92544 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TM9SF4Q92544 AC018470.1-201ENST00000624790 3129 ntBASIC17.38■□□□□ 0.37
TM9SF4Q92544 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TM9SF4Q92544 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TM9SF4Q92544 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms