Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RNF139Q8WU17 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RNF139Q8WU17 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 KRT18P38-201ENST00000449496 1282 ntBASIC19.36■□□□□ 0.69
RNF139Q8WU17 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF139Q8WU17 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.36■□□□□ 0.69
RNF139Q8WU17 MIR3917-201ENST00000580971 93 ntBASIC19.36■□□□□ 0.69
RNF139Q8WU17 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF139Q8WU17 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF139Q8WU17 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
RNF139Q8WU17 MYC-208ENST00000641036 567 ntBASIC19.36■□□□□ 0.69
RNF139Q8WU17 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF139Q8WU17 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF139Q8WU17 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF139Q8WU17 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF139Q8WU17 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF139Q8WU17 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF139Q8WU17 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF139Q8WU17 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF139Q8WU17 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF139Q8WU17 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF139Q8WU17 WIZP1-201ENST00000531444 2299 ntBASIC19.35■□□□□ 0.69
RNF139Q8WU17 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF139Q8WU17 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF139Q8WU17 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF139Q8WU17 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF139Q8WU17 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RNF139Q8WU17 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF139Q8WU17 SPDYE15P-201ENST00000424157 909 ntBASIC19.35■□□□□ 0.69
RNF139Q8WU17 AC112907.2-201ENST00000448639 330 ntBASIC19.35■□□□□ 0.69
RNF139Q8WU17 KRT18P41-201ENST00000518924 1277 ntBASIC19.35■□□□□ 0.69
RNF139Q8WU17 AC009065.1-201ENST00000564055 1225 ntBASIC19.35■□□□□ 0.69
RNF139Q8WU17 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.35■□□□□ 0.69
RNF139Q8WU17 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF139Q8WU17 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF139Q8WU17 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF139Q8WU17 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF139Q8WU17 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF139Q8WU17 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RNF139Q8WU17 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF139Q8WU17 AC112777.1-201ENST00000540175 1423 ntBASIC19.34■□□□□ 0.69
RNF139Q8WU17 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RNF139Q8WU17 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF139Q8WU17 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF139Q8WU17 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF139Q8WU17 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF139Q8WU17 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
RNF139Q8WU17 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RNF139Q8WU17 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF139Q8WU17 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF139Q8WU17 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF139Q8WU17 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF139Q8WU17 AL671277.2-201ENST00000458060 996 ntBASIC19.34■□□□□ 0.69
RNF139Q8WU17 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF139Q8WU17 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF139Q8WU17 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF139Q8WU17 AL157888.1-201ENST00000631930 593 ntBASIC19.34■□□□□ 0.69
RNF139Q8WU17 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF139Q8WU17 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
RNF139Q8WU17 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF139Q8WU17 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF139Q8WU17 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF139Q8WU17 KRT8P50-201ENST00000562022 1438 ntBASIC19.34■□□□□ 0.69
RNF139Q8WU17 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF139Q8WU17 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF139Q8WU17 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RNF139Q8WU17 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.33■□□□□ 0.69
RNF139Q8WU17 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF139Q8WU17 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF139Q8WU17 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.33■□□□□ 0.69
RNF139Q8WU17 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.33■□□□□ 0.69
RNF139Q8WU17 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RNF139Q8WU17 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF139Q8WU17 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF139Q8WU17 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF139Q8WU17 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
RNF139Q8WU17 MIR3180-4-201ENST00000582223 153 ntBASIC19.33■□□□□ 0.68
RNF139Q8WU17 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.33■□□□□ 0.68
RNF139Q8WU17 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF139Q8WU17 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RNF139Q8WU17 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF139Q8WU17 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF139Q8WU17 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF139Q8WU17 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF139Q8WU17 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF139Q8WU17 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms