Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.34■□□□□ 0.05
COMMD1Q8N668 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.34■□□□□ 0.05
COMMD1Q8N668 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD1Q8N668 AC126763.1-201ENST00000552015 2118 ntBASIC15.34■□□□□ 0.05
COMMD1Q8N668 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD1Q8N668 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD1Q8N668 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
COMMD1Q8N668 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.34■□□□□ 0.05
COMMD1Q8N668 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD1Q8N668 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD1Q8N668 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.34■□□□□ 0.05
COMMD1Q8N668 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
COMMD1Q8N668 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.34■□□□□ 0.05
COMMD1Q8N668 KRT18P16-201ENST00000510337 1294 ntBASIC15.34■□□□□ 0.05
COMMD1Q8N668 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.34■□□□□ 0.05
COMMD1Q8N668 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.34■□□□□ 0.05
COMMD1Q8N668 AC113410.3-201ENST00000623366 203 ntBASIC15.34■□□□□ 0.05
COMMD1Q8N668 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.34■□□□□ 0.05
COMMD1Q8N668 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.34■□□□□ 0.05
COMMD1Q8N668 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD1Q8N668 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD1Q8N668 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD1Q8N668 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD1Q8N668 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.34■□□□□ 0.05
COMMD1Q8N668 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.34■□□□□ 0.05
COMMD1Q8N668 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.34■□□□□ 0.05
COMMD1Q8N668 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
COMMD1Q8N668 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.33■□□□□ 0.05
COMMD1Q8N668 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.05
COMMD1Q8N668 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
COMMD1Q8N668 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
COMMD1Q8N668 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
COMMD1Q8N668 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
COMMD1Q8N668 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.33■□□□□ 0.05
COMMD1Q8N668 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
COMMD1Q8N668 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.33■□□□□ 0.04
COMMD1Q8N668 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD1Q8N668 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD1Q8N668 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD1Q8N668 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD1Q8N668 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD1Q8N668 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD1Q8N668 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.33■□□□□ 0.04
COMMD1Q8N668 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD1Q8N668 NIFKP9-201ENST00000419265 221 ntBASIC15.33■□□□□ 0.04
COMMD1Q8N668 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.33■□□□□ 0.04
COMMD1Q8N668 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.33■□□□□ 0.04
COMMD1Q8N668 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD1Q8N668 AL355355.2-201ENST00000442321 338 ntBASIC15.33■□□□□ 0.04
COMMD1Q8N668 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
COMMD1Q8N668 C1QL1P1-201ENST00000568105 661 ntBASIC15.33■□□□□ 0.04
COMMD1Q8N668 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.33■□□□□ 0.04
COMMD1Q8N668 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD1Q8N668 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD1Q8N668 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD1Q8N668 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD1Q8N668 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD1Q8N668 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD1Q8N668 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.33■□□□□ 0.04
COMMD1Q8N668 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
COMMD1Q8N668 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.33■□□□□ 0.04
COMMD1Q8N668 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
COMMD1Q8N668 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.32■□□□□ 0.04
COMMD1Q8N668 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
COMMD1Q8N668 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.32■□□□□ 0.04
COMMD1Q8N668 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
COMMD1Q8N668 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
COMMD1Q8N668 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.32■□□□□ 0.04
COMMD1Q8N668 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.32■□□□□ 0.04
COMMD1Q8N668 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.32■□□□□ 0.04
COMMD1Q8N668 CD177P1-201ENST00000606252 935 ntBASIC15.32■□□□□ 0.04
COMMD1Q8N668 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
COMMD1Q8N668 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.32■□□□□ 0.04
COMMD1Q8N668 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.32■□□□□ 0.04
COMMD1Q8N668 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.32■□□□□ 0.04
COMMD1Q8N668 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.32■□□□□ 0.04
COMMD1Q8N668 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.32■□□□□ 0.04
COMMD1Q8N668 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COMMD1Q8N668 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms