Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 MTCL1P1-201ENST00000446207 792 ntBASIC25.51■■□□□ 1.67
XRN1Q8IZH2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
XRN1Q8IZH2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 MTDHP4-201ENST00000600287 670 ntBASIC25.5■■□□□ 1.67
XRN1Q8IZH2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
XRN1Q8IZH2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 KRT18P27-201ENST00000427733 1299 ntBASIC25.49■■□□□ 1.67
XRN1Q8IZH2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 UNC93B6-202ENST00000528242 690 ntBASIC25.49■■□□□ 1.67
XRN1Q8IZH2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 AC002347.1-201ENST00000569543 541 ntBASIC25.49■■□□□ 1.67
XRN1Q8IZH2 AC134684.3-201ENST00000641758 218 ntBASIC25.49■■□□□ 1.67
XRN1Q8IZH2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 ALG1L5P-201ENST00000482043 771 ntBASIC25.49■■□□□ 1.67
XRN1Q8IZH2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
XRN1Q8IZH2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 AL157384.1-201ENST00000445995 2473 ntBASIC25.48■■□□□ 1.67
XRN1Q8IZH2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 LAGE3P1-201ENST00000425356 484 ntBASIC25.48■■□□□ 1.67
XRN1Q8IZH2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
XRN1Q8IZH2 SDHAP2-201ENST00000455183 2001 ntBASIC25.47■■□□□ 1.67
XRN1Q8IZH2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
XRN1Q8IZH2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
XRN1Q8IZH2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
XRN1Q8IZH2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
XRN1Q8IZH2 AC009947.1-201ENST00000444350 727 ntBASIC25.47■■□□□ 1.67
XRN1Q8IZH2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
XRN1Q8IZH2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC25.47■■□□□ 1.67
XRN1Q8IZH2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC25.47■■□□□ 1.67
XRN1Q8IZH2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms