Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 ZNF444P1-201ENST00000559497 298 ntBASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 LETM1P2-201ENST00000597330 2178 ntBASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM48Q8IWZ4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 PCED1CP-201ENST00000419887 785 ntBASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 MIR3917-201ENST00000580971 93 ntBASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 AC010240.3-201ENST00000607688 395 ntBASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 AL157888.1-201ENST00000631930 593 ntBASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 AP000550.4-202ENST00000639755 178 ntBASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 AC083906.6-201ENST00000641366 219 ntBASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 AC004408.2-201ENST00000623613 2777 ntBASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM48Q8IWZ4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM48Q8IWZ4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
TRIM48Q8IWZ4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM48Q8IWZ4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM48Q8IWZ4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM48Q8IWZ4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM48Q8IWZ4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
TRIM48Q8IWZ4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.08■□□□□ 0.49
TRIM48Q8IWZ4 IER3-202ENST00000376377 1350 ntBASIC18.08■□□□□ 0.49
TRIM48Q8IWZ4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
TRIM48Q8IWZ4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM48Q8IWZ4 AL357033.4-201ENST00000617703 1807 ntBASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 UPK3BP1-201ENST00000428678 509 ntBASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 AC104390.1-201ENST00000555663 520 ntBASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 AC083849.1-201ENST00000615227 514 ntBASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 Z98044.1-201ENST00000632503 1764 ntBASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRIM48Q8IWZ4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms